Next-Generation Sequencing-Based Approaches for Mutation Mapping and Identification in Caenorhabditis elegans

M Doitsidou, S Jarriault, RJ Poole - Genetics, 2016 - academic.oup.com
The use of next-generation sequencing (NGS) has revolutionized the way phenotypic traits
are assigned to genes. In this review, we describe NGS-based methods for mapping a …

Harnessing the power of genetics: fast forward genetics in Caenorhabditis elegans

J Singh - Molecular Genetics and Genomics, 2021 - Springer
Forward genetics is a powerful tool to unravel molecular mechanisms of diverse biological
processes. The success of genetic screens primarily relies on the ease of genetic …

MIP-MAP: High-Throughput Mapping of Caenorhabditis elegans Temperature-Sensitive Mutants via Molecular Inversion Probes

CA Mok, V Au, OA Thompson, ML Edgley… - Genetics, 2017 - academic.oup.com
Mutants remain a powerful means for dissecting gene function in model organisms such as
Caenorhabditis elegans. Massively parallel sequencing has simplified the detection of …

Evaluating alignment and variant-calling software for mutation identification in C. elegans by whole-genome sequencing

HE Smith, S Yun - PloS one, 2017 - journals.plos.org
Whole-genome sequencing is a powerful tool for analyzing genetic variation on a global
scale. One particularly useful application is the identification of mutations obtained by …

Mutation of NEKL-4/NEK10 and TTLL genes suppress neuronal ciliary degeneration caused by loss of CCPP-1 deglutamylase function

KM Power, JS Akella, A Gu, JD Walsh, S Bellotti… - PLoS …, 2020 - journals.plos.org
Ciliary microtubules are subject to post-translational modifications that act as a “Tubulin
Code” to regulate motor traffic, binding proteins and stability. In humans, loss of CCP1, a …

Mapping challenging mutations by whole-genome sequencing

HE Smith, AS Fabritius… - G3: Genes …, 2016 - academic.oup.com
Whole-genome sequencing provides a rapid and powerful method for identifying mutations
on a global scale, and has spurred a renewed enthusiasm for classical genetic screens in …

Rapid and Efficient Identification of Caenorhabditis elegans Legacy Mutations Using Hawaiian SNP-Based Mapping and Whole-Genome Sequencing

A Jaramillo-Lambert, AS Fuchsman… - G3: Genes …, 2015 - academic.oup.com
The production of viable embryos requires the coordination of many cellular processes,
including protein synthesis, cytoskeletal reorganization, establishment of polarity, cell …

Regulation of the MEI-1/MEI-2 Microtubule-Severing Katanin Complex in Early Caenorhabditis elegans Development

SM Beard, RB Smit, BG Chan… - G3: Genes, Genomes …, 2016 - academic.oup.com
After fertilization, rapid changes of the Caenorhabditis elegans cytoskeleton occur in the
transition from meiosis to mitosis, requiring precise regulation. The MEI-1/MEI-2 katanin …

From phenologs to silent suppressors: identifying potential therapeutic targets for human disease

A Golden - Molecular reproduction and development, 2017 - Wiley Online Library
Orthologous phenotypes, or phenologs, are seemingly unrelated phenotypes generated by
mutations in a conserved set of genes. Phenologs have been widely observed and accepted …

The E2F-DP1 Transcription Factor Complex Regulates Centriole Duplication in Caenorhabditis elegans

JG Miller, Y Liu, CW Williams, HE Smith… - G3: Genes …, 2016 - academic.oup.com
Centrioles play critical roles in the organization of microtubule-based structures, from the
mitotic spindle to cilia and flagella. In order to properly execute their various functions …