[HTML][HTML] The many pathways of RNA degradation

J Houseley, D Tollervey - Cell, 2009 - cell.com
From the earliest comparisons of RNA production with steady-state levels, it has been clear
that cells transcribe more RNA than they accumulate, implying the existence of active RNA …

The nuclear pore complex: bridging nuclear transport and gene regulation

C Strambio-De-Castillia, M Niepel… - Nature reviews Molecular …, 2010 - nature.com
Although the nuclear pore complex (NPC) is best known for its primary function as the key
regulator of molecular traffic between the cytoplasm and the nucleus, a growing body of …

Global analysis of eukaryotic mRNA degradation reveals Xrn1-dependent buffering of transcript levels

M Sun, B Schwalb, N Pirkl, KC Maier, A Schenk… - Molecular cell, 2013 - cell.com
The rates of mRNA synthesis and degradation determine cellular mRNA levels and can be
monitored by comparative dynamic transcriptome analysis (cDTA) that uses nonperturbing …

Enteric virulence associated protein VapC inhibits translation by cleavage of initiator tRNA

KS Winther, K Gerdes - Proceedings of the National …, 2011 - National Acad Sciences
Eukaryotic PIN (PilT N-terminal) domain proteins are ribonucleases involved in quality
control, metabolism and maturation of mRNA and rRNA. The majority of prokaryotic PIN …

RNA processing and export

S Hocine, RH Singer… - Cold Spring Harbor …, 2010 - cshperspectives.cshlp.org
Messenger RNAs undergo 5'capping, splicing, 3'-end processing, and export before
translation in the cytoplasm. It has become clear that these mRNA processing events are …

Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing

V Anantharaman, KS Makarova, AM Burroughs… - Biology direct, 2013 - Springer
Background The major role of enzymatic toxins that target nucleic acids in biological
conflicts at all levels has become increasingly apparent thanks in large part to the advances …

The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome

C Schneider, E Leung, J Brown… - Nucleic acids …, 2009 - academic.oup.com
Nuclear and cytoplasmic forms of the yeast exosome share 10 components, of which only
Rrp44/Dis3 is believed to possess 3′ exonuclease activity. We report that expression only …

Bacterial homologs of innate eukaryotic antiviral defenses with anti-phage activity highlight shared evolutionary roots of viral defenses

DF van den Berg, AR Costa, JQ Esser, I Stanciu… - Cell Host & Microbe, 2024 - cell.com
Prokaryotes have evolved a multitude of defense systems to protect against phage
predation. Some of these resemble eukaryotic genes involved in antiviral responses. Here …

The yeast nuclear pore complex and transport through it

JD Aitchison, MP Rout - Genetics, 2012 - academic.oup.com
Exchange of macromolecules between the nucleus and cytoplasm is a key regulatory event
in the expression of a cell's genome. This exchange requires a dedicated transport …

Comparison of preribosomal RNA processing pathways in yeast, plant and human cells–focus on coordinated action of endo‐and exoribonucleases

R Tomecki, PJ Sikorski, M Zakrzewska‐Placzek - FEBS letters, 2017 - Wiley Online Library
Proper regulation of ribosome biosynthesis is mandatory for cellular adaptation, growth and
proliferation. Ribosome biogenesis is the most energetically demanding cellular process …