[HTML][HTML] Biclustering on expression data: A review

B Pontes, R Giráldez, JS Aguilar-Ruiz - Journal of biomedical informatics, 2015 - Elsevier
Biclustering has become a popular technique for the study of gene expression data,
especially for discovering functionally related gene sets under different subsets of …

Clustering computer mouse tracking data with informed hierarchical shrinkage partition priors

Z Song, W Shen, M Vannucci, A Baldizon… - …, 2024 - academic.oup.com
Mouse-tracking data, which record computer mouse trajectories while participants perform
an experimental task, provide valuable insights into subjects' underlying cognitive …

Bi-EB: Empirical Bayesian Biclustering for Multi-Omics Data Integration Pattern Identification among Species

A Yazdanparast, L Li, C Zhang, L Cheng - Genes, 2022 - mdpi.com
Although several biclustering algorithms have been studied, few are used for cross-pattern
identification across species using multi-omics data mining. A fast empirical Bayesian …

The Gibbs-plaid biclustering model

T Chekouo, A Murua, W Raffelsberger - 2015 - projecteuclid.org
Supplement to “The Gibbs-plaid biclustering model”. A high-resolution version of the image
shown in Figure 6, as well as the complete biclustering results associated with the RD data …

Ensemble biclustering gene expression data based on the spectral clustering

L Yin, Y Liu - Neural Computing and Applications, 2018 - Springer
Many biclustering algorithms and bicluster criteria have been proposed in analyzing the
gene expression data. However, there are no clues about the choice of a specific …

Biclustering via semiparametric Bayesian inference

A Murua, FA Quintana - Bayesian Analysis, 2022 - projecteuclid.org
Motivated by classes of problems frequently found in the analysis of gene expression data,
we propose a semiparametric Bayesian model to detect biclusters, that is, subsets of …

A Bayesian hierarchical hidden Markov model for clustering and gene selection: Application to kidney cancer gene expression data

T Chekouo, H Mukherjee - Biometrical Journal, 2024 - Wiley Online Library
We introduce a Bayesian approach for biclustering that accounts for the prior functional
dependence between genes using hidden Markov models (HMMs). We utilize biological …

Performance evaluation and enhancement of biclustering algorithms

J Dale, A Nishimoto, T Obafemi-Ajayi - 2018 - bearworks.missouristate.edu
In gene expression data analysis, biclustering has proven to be an effective method of
finding local patterns among subsets of genes and conditions. The task of evaluating the …

A review on biclustering of gene expression microarray data: algorithms, effective measures and validations

BS Biswal, A Mohapatra… - International Journal of …, 2018 - inderscienceonline.com
Analysis of gene expression microarray data interprets the actual expression data for
revealing relevant information regarding genes, proteins, diseases etc. DNA microarrays …

Multi-objective optimization approach to find biclusters in gene expression data

J Dale, J Zhao, T Obafemi-Ajayi - 2019 IEEE Conference on …, 2019 - ieeexplore.ieee.org
Gene expression levels of organisms are measured by DNA microarrays. Finding biclusters
in gene expression matrices provides invaluable information about effects of disease at the …