Generative Recurrent Networks for De Novo Drug Design

A Gupta, AT Müller, BJH Huisman, JA Fuchs… - Molecular …, 2018 - Wiley Online Library
Generative artificial intelligence models present a fresh approach to chemogenomics and de
novo drug design, as they provide researchers with the ability to narrow down their search of …

Gating revisited: Deep multi-layer RNNs that can be trained

MO Turkoglu, S D'Aronco, JD Wegner… - IEEE Transactions on …, 2021 - ieeexplore.ieee.org
We propose a new STAckable Recurrent cell (STAR) for recurrent neural networks (RNNs),
which has fewer parameters than widely used LSTM [16] and GRU [10] while being more …

Convolutional sequence modeling revisited

S Bai, JZ Kolter, V Koltun - 2018 - openreview.net
Although both convolutional and recurrent architectures have a long history in sequence
prediction, the current" default" mindset in much of the deep learning community is that …

Generation of focused drug molecule library using recurrent neural network

J Zou, L Zhao, S Shi - Journal of Molecular Modeling, 2023 - Springer
Context With the wide application of deep learning in drug research and development, de
novo molecular design methods based on recurrent neural network (RNN) have strong …

Indylstms: independently recurrent LSTMs

P Gonnet, T Deselaers - ICASSP 2020-2020 IEEE International …, 2020 - ieeexplore.ieee.org
We introduce Independently Recurrent Long Short-term Memory cells: IndyLSTMs. These
differ from regular LSTM cells in that the recurrent weights are not modeled as a full matrix …

A Molecular Generative Model of COVID-19 Main Protease Inhibitors Using Long Short-Term Memory-Based Recurrent Neural Network

A Mehrzadi, E Rezaee, S Gharaghani… - Journal of …, 2024 - liebertpub.com
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a serious
threat to public health and prompted researchers to find anti-coronavirus 2019 (COVID-19) …

Grounded recurrent neural networks

A Vani, Y Jernite, D Sontag - arXiv preprint arXiv:1705.08557, 2017 - arxiv.org
In this work, we present the Grounded Recurrent Neural Network (GRNN), a recurrent neural
network architecture for multi-label prediction which explicitly ties labels to specific …

Rethinking full connectivity in recurrent neural networks

M Van Keirsbilck, A Keller, X Yang - arXiv preprint arXiv:1905.12340, 2019 - arxiv.org
Recurrent neural networks (RNNs) are omnipresent in sequence modeling tasks. Practical
models usually consist of several layers of hundreds or thousands of neurons which are fully …

Deep composer: Deep neural hashing and retrieval approach to automatic music generation

B Royal, K Hua, B Zhang - 2020 IEEE International Conference …, 2020 - ieeexplore.ieee.org
With recent advances in artificial intelligence, recurrent neural networks have successfully
generated pleasing melodies; however, they have struggled to create a full song that has …

Learning and evaluation methodologies for polyphonic music sequence prediction with LSTMs

A Ycart, E Benetos - IEEE/ACM Transactions on Audio, Speech …, 2020 - ieeexplore.ieee.org
Music language models play an important role for various music signal and symbolic music
processing tasks, such as music generation, symbolic music classification, or automatic …