Deformable medical image registration: A survey

A Sotiras, C Davatzikos… - IEEE transactions on …, 2013 - ieeexplore.ieee.org
Deformable image registration is a fundamental task in medical image processing. Among
its most important applications, one may cite: 1) multi-modality fusion, where information …

Medical image registration: a review

FPM Oliveira, JMRS Tavares - Computer methods in biomechanics …, 2014 - Taylor & Francis
This paper presents a review of automated image registration methodologies that have been
used in the medical field. The aim of this paper is to be an introduction to the field, provide …

Quicksilver: Fast predictive image registration–a deep learning approach

X Yang, R Kwitt, M Styner, M Niethammer - NeuroImage, 2017 - Elsevier
This paper introduces Quicksilver, a fast deformable image registration method. Quicksilver
registration for image-pairs works by patch-wise prediction of a deformation model based …

Avoiding a replication crisis in deep-learning-based bioimage analysis

RF Laine, I Arganda-Carreras, R Henriques… - Nature …, 2021 - nature.com
Deep learning algorithms are powerful tools for analyzing, restoring and transforming
bioimaging data. One promise of deep learning is parameter-free one-click image analysis …

Unsupervised 3D end-to-end medical image registration with volume tweening network

S Zhao, T Lau, J Luo, I Eric, C Chang… - IEEE journal of …, 2019 - ieeexplore.ieee.org
3D medical image registration is of great clinical importance. However, supervised learning
methods require a large amount of accurately annotated corresponding control points (or …

The Insight ToolKit image registration framework

BB Avants, NJ Tustison, M Stauffer, G Song… - Frontiers in …, 2014 - frontiersin.org
Publicly available scientific resources help establish evaluation standards, provide a
platform for teaching and improve reproducibility. Version 4 of the Insight ToolKit (ITK4) …

A reproducible evaluation of ANTs similarity metric performance in brain image registration

BB Avants, NJ Tustison, G Song, PA Cook, A Klein… - Neuroimage, 2011 - Elsevier
The United States National Institutes of Health (NIH) commit significant support to open-
source data and software resources in order to foment reproducibility in the biomedical …

MIND: Modality independent neighbourhood descriptor for multi-modal deformable registration

MP Heinrich, M Jenkinson, M Bhushan, T Matin… - Medical image …, 2012 - Elsevier
Deformable registration of images obtained from different modalities remains a challenging
task in medical image analysis. This paper addresses this important problem and proposes …

Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain

BB Avants, CL Epstein, M Grossman, JC Gee - Medical image analysis, 2008 - Elsevier
One of the most challenging problems in modern neuroimaging is detailed characterization
of neurodegeneration. Quantifying spatial and longitudinal atrophy patterns is an important …

Diffeomorphic demons: Efficient non-parametric image registration

T Vercauteren, X Pennec, A Perchant, N Ayache - NeuroImage, 2009 - Elsevier
We propose an efficient non-parametric diffeomorphic image registration algorithm based on
Thirion's demons algorithm. In the first part of this paper, we show that Thirion's demons …