[HTML][HTML] Role of vertical and horizontal microbial transmission of antimicrobial resistance genes in early life: insights from maternal-infant dyads

M Bernabeu, E Cabello-Yeves, E Flores… - Current opinion in …, 2024 - Elsevier
Highlights•ARGs and MGEs are vertically trasferred from mothers to their offspring.•Antibiotic
exposure, C-section and lack of breastfeeding are risk factors for acquiring ARGs and …

PHROG: families of prokaryotic virus proteins clustered using remote homology

P Terzian, E Olo Ndela, C Galiez… - NAR Genomics and …, 2021 - academic.oup.com
Viruses are abundant, diverse and ancestral biological entities. Their diversity is high, both
in terms of the number of different protein families encountered and in the sequence …

Microbial genomic island discovery, visualization and analysis

C Bertelli, KE Tilley, FSL Brinkman - Briefings in bioinformatics, 2019 - academic.oup.com
Horizontal gene transfer (also called lateral gene transfer) is a major mechanism for
microbial genome evolution, enabling rapid adaptation and survival in specific niches …

Genome analysis of a coral-associated bacterial consortium highlights complementary hydrocarbon degradation ability and other beneficial mechanisms for the host

H Villela, F Modolon, J Schultz… - Scientific Reports, 2023 - nature.com
Here we report the oil degradation genetic potential of six oil-degrading bacteria (ODB),
previously used as a bioremediation consortium, isolated from the hydrocoral Millepora …

Improved genomic island predictions with IslandPath-DIMOB

C Bertelli, FSL Brinkman - Bioinformatics, 2018 - academic.oup.com
Abstract Motivation Genomic islands (GIs) are clusters of genes of probable horizontal origin
that play a major role in bacterial and archaeal genome evolution and microbial adaptability …

Occurrence of carbapenemase-producing Enterobacteriaceae in a Portuguese river: blaNDM, blaKPC and blaGES among the detected genes

P Teixeira, M Tacão, L Pureza, J Gonçalves… - Environmental …, 2020 - Elsevier
Carbapenems are used as last-resort drugs to treat infections caused by multidrug-resistant
bacteria. Despite the increasing number of reports of carbapenem-resistant …

Antimicrobial resistance surveillance in the genomic age

AG McArthur, KK Tsang - Annals of the New York Academy of …, 2017 - Wiley Online Library
The loss of effective antimicrobials is reducing our ability to protect the global population
from infectious disease. However, the field of antibiotic drug discovery and the public health …

Pan-Genome Plasticity and Virulence Factors: A Natural Treasure Trove for Acinetobacter baumannii

T Karampatakis, K Tsergouli, P Behzadi - Antibiotics, 2024 - mdpi.com
Acinetobacter baumannii is a Gram-negative pathogen responsible for a variety of
community-and hospital-acquired infections. It is recognized as a life-threatening pathogen …

Insight Into Whole Genome of Aeromonas veronii Isolated From Freshwater Fish by Resistome Analysis Reveal Extensively Antibiotic Resistant Traits

R Sakulworakan, P Chokmangmeepisarn… - Frontiers in …, 2021 - frontiersin.org
Aeromonas veronii outbreaks in tilapia farming caused relatively high mortalities, and the
bacteria was resistant to many kinds of antimicrobials used in Thailand aquaculture …

Exfoliative toxin E, a new Staphylococcus aureus virulence factor with host-specific activity

I Imanishi, A Nicolas, ACB Caetano, TLP Castro… - Scientific Reports, 2019 - nature.com
Exfoliative toxins (ETs) are secreted virulence factors produced by staphylococci. These
serine proteases specifically cleave desmoglein 1 (Dsg1) in mammals and are key elements …