[HTML][HTML] The ecology and evolution of pangenomes

MA Brockhurst, E Harrison, JPJ Hall, T Richards… - Current Biology, 2019 - cell.com
Since the first genome-scale comparisons, it has been evident that the genomes of many
species are unbound by strict vertical descent: Large differences in gene content can occur …

Eukaryogenesis and oxygen in Earth history

DB Mills, RA Boyle, SJ Daines, EA Sperling… - Nature ecology & …, 2022 - nature.com
The endosymbiotic origin of mitochondria during eukaryogenesis has long been viewed as
an adaptive response to the oxygenation of Earth's surface environment, presuming a …

[HTML][HTML] Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

TO Delmont, M Gaia, DD Hinsinger, P Fremont… - Cell Genomics, 2022 - cell.com
Marine planktonic eukaryotes play critical roles in global biogeochemical cycles and climate.
However, their poor representation in culture collections limits our understanding of the …

[HTML][HTML] Divergent genomic trajectories predate the origin of animals and fungi

E Ocaña-Pallarès, TA Williams, D López-Escardó… - Nature, 2022 - nature.com
Animals and fungi have radically distinct morphologies, yet both evolved within the same
eukaryotic supergroup: Opisthokonta,. Here we reconstructed the trajectory of genetic …

Origin and evolution of the plant immune system

GZ Han - New Phytologist, 2019 - Wiley Online Library
Contents Summary 70 I. Introduction 70 II. Ancient associations between plants and
microbes 72 III. Evolutionary dynamics of plant–pathogen interactions 74 IV. Evolutionary …

Proposal of the reverse flow model for the origin of the eukaryotic cell based on comparative analyses of Asgard archaeal metabolism

A Spang, CW Stairs, N Dombrowski, L Eme… - Nature …, 2019 - nature.com
The origin of eukaryotes represents an unresolved puzzle in evolutionary biology. Current
research suggests that eukaryotes evolved from a merger between a host of archaeal …

[HTML][HTML] Horizontal transfer and evolution of transposable elements in vertebrates

HH Zhang, J Peccoud, MRX Xu, XG Zhang… - Nature …, 2020 - nature.com
Horizontal transfer of transposable elements (HTT) is an important process shaping
eukaryote genomes, yet very few studies have quantified this phenomenon on a large scale …

[HTML][HTML] Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes

CW Stairs, P Táborský, ED Salomaki, M Kolisko… - Current Biology, 2021 - cell.com
Discoveries of diverse microbial eukaryotes and their inclusion in comprehensive
phylogenomic analyses have crucially re-shaped the eukaryotic tree of life in the 21st …

[HTML][HTML] Horizontal gene transfer in human-associated microorganisms inferred by phylogenetic reconstruction and reconciliation

H Jeong, B Arif, G Caetano-Anollés, KM Kim, A Nasir - Scientific reports, 2019 - nature.com
Horizontal gene transfer (HGT) is widespread in the evolution of prokaryotes, especially
those associated with the human body. Here, we implemented large-scale gene-species …

On the origin of the nucleus: a hypothesis

B Baum, A Spang - Microbiology and Molecular Biology Reviews, 2023 - Am Soc Microbiol
In this hypothesis article, we explore the origin of the eukaryotic nucleus. In doing so, we first
look afresh at the nature of this defining feature of the eukaryotic cell and its core functions …