Fungal effectors and plant susceptibility

L Lo Presti, D Lanver, G Schweizer… - Annual review of …, 2015 - annualreviews.org
Plants can be colonized by fungi that have adopted highly diverse lifestyles, ranging from
symbiotic to necrotrophic. Colonization is governed in all systems by hundreds of secreted …

The two-speed genomes of filamentous pathogens: waltz with plants

S Dong, S Raffaele, S Kamoun - Current opinion in genetics & …, 2015 - Elsevier
Fungi and oomycetes include deep and diverse lineages of eukaryotic plant pathogens. The
last 10 years have seen the sequencing of the genomes of a multitude of species of these so …

Prediction of effector protein structures from fungal phytopathogens enables evolutionary analyses

K Seong, KV Krasileva - Nature Microbiology, 2023 - nature.com
Elucidating the similarity and diversity of pathogen effectors is critical to understand their
evolution across fungal phytopathogens. However, rapid divergence that diminishes …

[HTML][HTML] Genera of phytopathogenic fungi: GOPHY 4

Q Chen, M Bakhshi, Y Balci, KD Broders… - Studies in …, 2022 - ncbi.nlm.nih.gov
This paper is the fourth contribution in the Genera of Phytopathogenic Fungi (GOPHY)
series. The series provides morphological descriptions and information about the pathology …

Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0

J Sperschneider, PN Dodds… - Molecular plant …, 2018 - Wiley Online Library
Plant‐pathogenic fungi secrete effector proteins to facilitate infection. We describe extensive
improvements to EffectorP, the first machine learning classifier for fungal effector prediction …

[HTML][HTML] What are the 100 most cited fungal genera?

CS Bhunjun, YJ Chen, C Phukhamsakda… - Studies in …, 2024 - ingentaconnect.com
The global diversity of fungi has been estimated between 2 to 11 million species, of which
only about 155 000 have been named. Most fungi are invisible to the unaided eye, but they …

EffectorP: predicting fungal effector proteins from secretomes using machine learning

J Sperschneider, DM Gardiner, PN Dodds… - New …, 2016 - Wiley Online Library
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell
to facilitate infection. Computational effector candidate identification and subsequent …

Apollo: democratizing genome annotation

NA Dunn, DR Unni, C Diesh… - PLoS computational …, 2019 - journals.plos.org
Genome annotation is the process of identifying the location and function of a genome's
encoded features. Improving the biological accuracy of annotation is a complex and iterative …

Elucidating the role of effectors in plant-fungal interactions: progress and challenges

C Selin, TR De Kievit, MF Belmonte… - Frontiers in …, 2016 - frontiersin.org
Pathogenic fungi have diverse growth lifestyles that support fungal colonization on plants.
Successful colonization and infection for all lifestyles depends upon the ability to modify …

Asian soybean rust in Brazil: past, present, and future

CV Godoy, CDS Seixas, RM Soares… - Pesquisa …, 2016 - SciELO Brasil
Asian soybean rust, caused by the fungus Phakopsora pachyrhizi, is the most severe
disease of the crop and can cause yield losses of up to 90%. The disease was first reported …