[HTML][HTML] Transformer architecture and attention mechanisms in genome data analysis: a comprehensive review

SR Choi, M Lee - Biology, 2023 - mdpi.com
Simple Summary The rapidly advancing field of deep learning, specifically transformer-
based architectures and attention mechanisms, has found substantial applicability in …

[HTML][HTML] Deep learning techniques with genomic data in cancer prognosis: A comprehensive review of the 2021–2023 literature

M Lee - Biology, 2023 - mdpi.com
Simple Summary The ongoing advancements in deep learning, notably its use in predicting
cancer survival through genomic data analysis, calls for an up-to-date review. This paper …

Mathematical analysis and performance evaluation of the gelu activation function in deep learning

M Lee - Journal of Mathematics, 2023 - Wiley Online Library
Selecting the most suitable activation function is a critical factor in the effectiveness of deep
learning models, as it influences their learning capacity, stability, and computational …

GELU activation function in deep learning: a comprehensive mathematical analysis and performance

M Lee - arXiv preprint arXiv:2305.12073, 2023 - arxiv.org
Selecting the most suitable activation function is a critical factor in the effectiveness of deep
learning models, as it influences their learning capacity, stability, and computational …

[HTML][HTML] Predicting the recurrence and overall survival of patients with glioma based on histopathological images using deep learning

C Luo, J Yang, Z Liu, D Jing - Frontiers in Neurology, 2023 - frontiersin.org
Background A deep learning (DL) model based on representative biopsy tissues can predict
the recurrence and overall survival of patients with glioma, leading to optimized …

Deep learning model with L1 penalty for predicting breast cancer metastasis using gene expression data

J Kim, M Lee, J Seok - Machine Learning: Science and …, 2023 - iopscience.iop.org
Breast cancer has the highest incidence and death rate among women; moreover, its
metastasis to other organs increases the mortality rate. Since several studies have reported …

An alternative extension of telomeres related prognostic model to predict survival in lower grade glioma

Y Cai, H Guo, JP Zhou, G Zhu, H Qu, L Liu… - Journal of Cancer …, 2023 - Springer
Objective The alternative extension of the telomeres (ALT) mechanism is activated in lower
grade glioma (LGG), but the role of the ALT mechanism has not been well discussed. The …

AttOmics: attention-based architecture for diagnosis and prognosis from omics data

A Beaude, M Rafiee Vahid, F Augé, F Zehraoui… - …, 2023 - academic.oup.com
Motivation The increasing availability of high-throughput omics data allows for considering a
new medicine centered on individual patients. Precision medicine relies on exploiting these …

[HTML][HTML] A multi-omics analysis-based model to predict the prognosis of low-grade gliomas

Z Du, Y Jiang, Y Yang, X Kang, J Yan, B Liu… - Scientific Reports, 2024 - nature.com
Lower-grade gliomas (LGGs) exhibit highly variable clinical behaviors, while classic
histology characteristics cannot accurately reflect the authentic biological behaviors, clinical …

[HTML][HTML] Estimating the prognosis of low-grade glioma with gene attention using multi-omics and multi-modal schemes

SR Choi, M Lee - Biology, 2022 - mdpi.com
Simple Summary The estimation of the prognosis of low-grade glioma (LGG) patients using
deep learning models and gene expression data has been intensively studied in recent …