Molecular biology and pathogenicity of mycoplasmas

S Razin, D Yogev, Y Naot - Microbiology and molecular biology …, 1998 - Am Soc Microbiol
The recent sequencing of the entire genomes of Mycoplasma genitalium and M.
pneumoniae has attracted considerable attention to the molecular biology of mycoplasmas …

Phase and antigenic variation in bacteria

MW Van Der Woude, AJ Bäumler - Clinical microbiology reviews, 2004 - Am Soc Microbiol
Phase and antigenic variation result in a heterogenic phenotype of a clonal bacterial
population, in which individual cells either express the phase-variable protein (s) or not, or …

Type I restriction enzymes and their relatives

WAM Loenen, DTF Dryden, EA Raleigh… - Nucleic acids …, 2014 - academic.oup.com
Type I restriction enzymes (REases) are large pentameric proteins with separate restriction
(R), methylation (M) and DNA sequence-recognition (S) subunits. They were the first …

Genome Analysis of Listeria monocytogenes Sequence Type 8 Strains Persisting in Salmon and Poultry Processing Environments and Comparison with Related …

A Fagerlund, S Langsrud, BCT Schirmer, T Møretrø… - PloS one, 2016 - journals.plos.org
Listeria monocytogenes is an important foodborne pathogen responsible for the disease
listeriosis, and can be found throughout the environment, in many foods and in food …

Pangenome analysis of Bifidobacterium longum and site-directed mutagenesis through by-pass of restriction-modification systems

A O'callaghan, F Bottacini, M O'Connell Motherway… - BMC genomics, 2015 - Springer
Background Bifidobacterial genome analysis has provided insights as to how these gut
commensals adapt to and persist in the human GIT, while also revealing genetic diversity …

Phase-variable methylation and epigenetic regulation by type I restriction–modification systems

M De Ste Croix, I Vacca, MJ Kwun… - FEMS microbiology …, 2017 - academic.oup.com
Epigenetic modifications in bacteria, such as DNA methylation, have been shown to affect
gene regulation, thereby generating cells that are isogenic but with distinctly different …

Evolutionary role of restriction/modification systems as revealed by comparative genome analysis

EPC Rocha, A Danchin, A Viari - Genome research, 2001 - genome.cshlp.org
Type II restriction modification systems (RMSs) have been regarded either as defense tools
or as molecular parasites of bacteria. We extensively analyzed their evolutionary role from …

A family of phase-variable restriction enzymes with differing specificities generated by high-frequency gene rearrangements

K Dybvig, R Sitaraman… - Proceedings of the …, 1998 - National Acad Sciences
The hsd genes of Mycoplasma pulmonis encode restriction and modification enzymes
exhibiting a high degree of sequence similarity to the type I enzymes of enteric bacteria. The …

Role of restriction-modification systems in prokaryotic evolution and ecology

AS Ershova, IS Rusinov, SA Spirin, AS Karyagina… - Biochemistry …, 2015 - Springer
Restriction–modification (RM) systems are able to methylate or cleave DNA depending on
methylation status of their recognition site. It allows them to protect bacterial cells from …

Prokaryotic horizontal gene transfer within the human holobiont: ecological-evolutionary inferences, implications and possibilities

R Sitaraman - Microbiome, 2018 - Springer
The ubiquity of horizontal gene transfer in the living world, especially among prokaryotes,
raises interesting and important scientific questions regarding its effects on the human …