Human microbiome: an academic update on human body site specific surveillance and its possible role

E Dekaboruah, MV Suryavanshi, D Chettri… - Archives of …, 2020 - Springer
Human body is inhabited by vast number of microorganisms which form a complex
ecological community and influence the human physiology, in the aspect of both health and …

Metagenomics, metatranscriptomics, and metabolomics approaches for microbiome analysis: supplementary issue: bioinformatics methods and applications for big …

V Aguiar-Pulido, W Huang… - Evolutionary …, 2016 - journals.sagepub.com
Microbiomes are ubiquitous and are found in the ocean, the soil, and in/on other living
organisms. Changes in the microbiome can impact the health of the environmental niche in …

The effect of 16S rRNA region choice on bacterial community metabarcoding results

YS Bukin, YP Galachyants, IV Morozov, SV Bukin… - Scientific data, 2019 - nature.com
In this work, we compare the resolution of V2-V3 and V3-V4 16S rRNA regions for the
purposes of estimating microbial community diversity using paired-end Illumina MiSeq …

The bovine milk microbiota: insights and perspectives from-omics studies

MF Addis, A Tanca, S Uzzau, G Oikonomou… - Molecular …, 2016 - pubs.rsc.org
Recent significant progress in culture-independent techniques, together with the parallel
development of-omics technologies and data analysis capabilities, have led to a new …

Analysis of plant microbe interactions in the era of next generation sequencing technologies

C Knief - Frontiers in plant science, 2014 - frontiersin.org
Next generation sequencing (NGS) technologies have impressively accelerated research in
biological science during the last years by enabling the production of large volumes of …

SCycDB: a curated functional gene database for metagenomic profiling of sulphur cycling pathways

X Yu, J Zhou, W Song, M Xu, Q He… - Molecular Ecology …, 2021 - Wiley Online Library
Microorganisms play important roles in the biogeochemical cycling of sulphur (S), an
essential element in the Earth's biosphere. Shotgun metagenome sequencing has opened a …

[图书][B] Marine microbiology: ecology & applications

CB Munn - 2019 - taylorfrancis.com
The third edition of this bestselling text has been rigorously updated to reflect major new
discoveries and concepts since 2011, especially progress due to extensive application of …

The human gut microbiome, a taxonomic conundrum

SA Sankar, JC Lagier, P Pontarotti, D Raoult… - Systematic and applied …, 2015 - Elsevier
From culture to metagenomics, within only 130 years, our knowledge of the human
microbiome has considerably improved. With> 1000 microbial species identified to date, the …

[HTML][HTML] Omics technologies for improved diagnosis and treatment of colorectal cancer: Technical advancement and major perspectives

N Dalal, R Jalandra, M Sharma, H Prakash… - Biomedicine & …, 2020 - Elsevier
Colorectal cancer (CRC) ranks third among the most commonly occurring cancers
worldwide, and it causes half a million deaths annually. Alongside mechanistic study for …

[HTML][HTML] Bioinformatics for NGS-based metagenomics and the application to biogas research

S Jünemann, N Kleinbölting, S Jaenicke, C Henke… - Journal of …, 2017 - Elsevier
Metagenomics has proven to be one of the most important research fields for microbial
ecology during the last decade. Starting from 16S rRNA marker gene analysis for the …