Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders

NN Parikshak, MJ Gandal, DH Geschwind - Nature Reviews Genetics, 2015 - nature.com
Genetic and genomic approaches have implicated hundreds of genetic loci in
neurodevelopmental disorders and neurodegeneration, but mechanistic understanding …

Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review

P Csermely, T Korcsmáros, HJM Kiss, G London… - Pharmacology & …, 2013 - Elsevier
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …

Molecular signatures of antibody responses derived from a systems biology study of five human vaccines

S Li, N Rouphael, S Duraisingham… - Nature …, 2014 - nature.com
Many vaccines induce protective immunity via antibodies. Systems biology approaches
have been used to determine signatures that can be used to predict vaccine-induced …

A systematic survey of loss-of-function variants in human protein-coding genes

DG MacArthur, S Balasubramanian, A Frankish… - Science, 2012 - science.org
Genome-sequencing studies indicate that all humans carry many genetic variants predicted
to cause loss of function (LoF) of protein-coding genes, suggesting unexpected redundancy …

Rare de novo variants associated with autism implicate a large functional network of genes involved in formation and function of synapses

SR Gilman, I Iossifov, D Levy, M Ronemus, M Wigler… - Neuron, 2011 - cell.com
Identification of complex molecular networks underlying common human phenotypes is a
major challenge of modern genetics. In this study, we develop a method for network-based …

Genetic modifiers and rare Mendelian disease

KMTH Rahit, M Tarailo-Graovac - Genes, 2020 - mdpi.com
Despite advances in high-throughput sequencing that have revolutionized the discovery of
gene defects in rare Mendelian diseases, there are still gaps in translating individual …

Prioritizing candidate disease genes by network-based boosting of genome-wide association data

I Lee, UM Blom, PI Wang, JE Shim… - Genome …, 2011 - genome.cshlp.org
Network “guilt by association”(GBA) is a proven approach for identifying novel disease
genes based on the observation that similar mutational phenotypes arise from functionally …

Characterising and predicting haploinsufficiency in the human genome

N Huang, I Lee, EM Marcotte, ME Hurles - PLoS genetics, 2010 - journals.plos.org
Haploinsufficiency, wherein a single functional copy of a gene is insufficient to maintain
normal function, is a major cause of dominant disease. Human disease studies have …

Caenorhabditis elegans: An Emerging Model in Biomedical and Environmental Toxicology

MCK Leung, PL Williams, A Benedetto… - Toxicological …, 2008 - academic.oup.com
The nematode Caenorhabditis elegans has emerged as an important animal model in
various fields including neurobiology, developmental biology, and genetics. Characteristics …

Network‐based global inference of human disease genes

X Wu, R Jiang, MQ Zhang, S Li - Molecular systems biology, 2008 - embopress.org
Deciphering the genetic basis of human diseases is an important goal of biomedical
research. On the basis of the assumption that phenotypically similar diseases are caused by …