A Warshel, PK Sharma, M Kato, Y Xiang, H Liu… - Chemical …, 2006 - ACS Publications
Enzymatic reactions play a fundamentally important role in controlling and performing most life processes. 1-3 Thus, understanding how enzymes work has both fundamental and …
Phosphoryl transfer plays key roles in signaling, energy transduction, protein synthesis, and maintaining the integrity of the genetic material. On the surface, it would appear to be a …
The environment plays a key role in the determination of the properties and reactivity of substances in condensed phases. The complexity of chemical phenomena in solution has …
PA Schwartz, BW Murray - Bioorganic chemistry, 2011 - Elsevier
Protein kinases are fascinating biological catalysts with a rapidly expanding knowledge base, a growing appreciation in cell regulatory control, and an ascendant role in successful …
Hybrid quantum mechanical/molecular mechanical (QM/MM) approaches have been used to provide a general scheme for chemical reactions in proteins. However, such approaches …
K Nam, J Gao, DM York - Journal of Chemical Theory and …, 2005 - ACS Publications
A method is presented for the efficient evaluation of long-range electrostatic forces in combined quantum mechanical and molecular mechanical (QM/MM) calculations of periodic …
J Florián, A Warshel - The Journal of Physical Chemistry B, 1998 - ACS Publications
Phosphate hydrolysis plays a major role in many biological processes. To fully understand such processes, it is essential to obtain a quantitative description of the corresponding …
J Florián, A Warshel - The Journal of Physical Chemistry B, 1997 - ACS Publications
A new parametrization of the Langevin dipole (LD) model is developed for ab initio calculations of chemical processes in aqueous solution. This parametrization is …
M Klähn, E Rosta, A Warshel - Journal of the American Chemical …, 2006 - ACS Publications
The nature of the hydrolysis of phosphate monoester dianions in solutions and in proteins is a problem of significant current interest. The present work explores this problem by …