Green's function method in the theory of Brownian motors

VM Rozenbaum, IV Shapochkina… - Physics …, 2019 - iopscience.iop.org
We present the main results of the theory of Brownian motors obtained using the authors'
approach, in which a Brownian particle moving in a slightly fluctuating potential profile is …

[HTML][HTML] Mechanical properties of tubulin intra-and inter-dimer interfaces and their implications for microtubule dynamic instability

VA Fedorov, PS Orekhov, EG Kholina… - PLoS computational …, 2019 - journals.plos.org
Thirteen tubulin protofilaments, made of αβ-tubulin heterodimers, interact laterally to
produce cytoskeletal microtubules. Microtubules exhibit the striking property of dynamic …

Fine structure and dynamics of EB3 binding zones on microtubules in fibroblast cells

VV Mustyatsa, AV Kostarev, AV Tvorogova… - Molecular biology of …, 2019 - Am Soc Cell Biol
End-binding (EB) proteins associate with the growing tips of microtubules (MTs) and
modulate their dynamics directly and indirectly, by recruiting essential factors to fine-tune …

[HTML][HTML] Chemomechanical simulation of microtubule dynamics with explicit lateral bond dynamics

M Schmidt, J Kierfeld - Frontiers in Physics, 2021 - frontiersin.org
We introduce and parameterize a chemomechanical model of microtubule dynamics on the
dimer level, which is based on the allosteric tubulin model and includes attachment …

About Biophysics and the Chair of Biophysics at the Faculty of Physics of Moscow State University

VA Tverdislov, VI Lobyshev, LV Yakovenko… - Biophysics, 2023 - Springer
Abstract The first Chair of Biophysics in the world science, created at the Faculty of Physics
of Lomonosov Moscow State University, has crossed the 63-year milestone of its history. Its …

Performance analysis of different computational architectures: Molecular dynamics in application to protein assemblies, illustrated by microtubule and electron transfer …

VA Fedorov, EG Kholina, IB Kovalenko… - Supercomputing …, 2018 - superfri.org
All-atom molecular dynamics simulation represents a computationally challenging, but
powerful approach for studying conformational changes and interactions of biomolecules …

Thermodynamic force thresholds biomolecular behavior

MM Lin - arXiv preprint arXiv:2209.09372, 2022 - arxiv.org
In living systems, collective molecular behavior is driven by thermodynamic forces in the
form of chemical gradients. Leveraging recent advances in the field of nonequilibrium …

[PDF][PDF] Одностороннее уширение частотной зависимости скорости броуновского мотора

НГ Шкода, ТЕ Корочкова, ВМ Розенбаум… - Хімія, фізика та …, 2019 - researchgate.net
Известно, что ширины спектральных линий предоставляют исследователю
разнообразную важную информацию: о свойствах материалов, характере …

[PDF][PDF] Chemomechanical simulation of microtubule dynamics

M Schmidt - 2020 - eldorado.tu-dortmund.de
I want to thank Prof. Dr. Jan Kierfeld, my supervisor for this thesis, and PD Dr. Ute Löw for
being the second referee. I am grateful to Dr. Carsten Nase for technical support and Dr …

Одностороннє розширення частотної залежності швидкості броунівського мотора

NG Shkoda, TY Korochkova, VM Rozenbaum… - Хімія, фізика та …, 2019 - cpts.com.ua
Анотація Відомо, що ширини спектральних ліній містять важливу інформацію: про
властивості матеріалів, характер взаємодії частинок речовини, фізичні параметри …