From data to decisions: Leveraging artificial intelligence and machine learning in combating antimicrobial resistance–A comprehensive review

JMP de la Lastra, SJT Wardell, T Pal… - Journal of medical …, 2024 - Springer
The emergence of drug-resistant bacteria poses a significant challenge to modern medicine.
In response, Artificial Intelligence (AI) and Machine Learning (ML) algorithms have emerged …

Mesoscopic model and free energy landscape for protein-DNA binding sites: analysis of cyanobacterial promoters

R Tapia-Rojo, JJ Mazo, JA Hernandez… - PLoS Computational …, 2014 - journals.plos.org
The identification of protein binding sites in promoter sequences is a key problem to
understand and control regulation in biochemistry and biotechnological processes. We use …

From Data to Decisions: Leveraging Artificial Intelligence and Machine Learning in Combating Antimicrobial Resistance–a Comprehensive Review

JM Pérez de Lastra, SJT Wardell, T Pal… - 2024 - digital.csic.es
The emergence of drug-resistant bacteria poses a significant challenge to modern medicine.
In response, Artificial Intelligence (AI) and Machine Learning (ML) algorithms have emerged …

Identification of differentially expressed genes in microarray data in a principal component space

L Ospina, L López-Kleine - SpringerPlus, 2013 - Springer
Microarray experiments are often conducted in order to compare gene expression between
two conditions. Tests to detected mean differential expression of genes between conditions …

[HTML][HTML] Data mining and influential analysis of gene expression data for plant resistance gene identification in tomato (Solanum lycopersicum)

F Torres-Avilés, JS Romeo… - Electronic Journal of …, 2014 - SciELO Chile
Resumen TORRES-AVILES, Francisco; ROMEO, José S y LOPEZ-KLEINE, Liliana. Data
mining and influential analysis of gene expression data for plant resistance gene …

Gene functional prediction using clustering methods for the analysis of tomato microarray data

L López-Kleine, J Romeo, F Torres-Avilés - 7th International Conference …, 2013 - Springer
Molecular mechanisms of plant-pathogen interaction have been studied thoroughly because
of its importance for crop production and food supply. This knowledge is a starting point in …

Detection of influent virulence and resistance genes in microarray data through quasi likelihood modeling

JS Romeo, F Torres-Avilés, L López-Kleine - Molecular genetics and …, 2013 - Springer
Publicly available genomic data are a great source of biological knowledge that can be
extracted when appropriate data analysis is used. Predicting the biological function of genes …

[HTML][HTML] Identification of Global Gene Expression Shifts Using Microarray Data from Different Biological Conditions

RT Cuevas, L Ló, JA Ordoñ - Open Journal of Statistics, 2015 - scirp.org
Gene expression data have been very useful during the past two decades for the detection
of differentially expressed genes when two (or more) biological conditions are compared …

Functional Prediction: Gene Filtering Based on Multivariate Techniques

L Lopez-Kleine, R Montano… - Current …, 2017 - ingentaconnect.com
Background: Gene expression data is available on several organisms of interest in publicly
available data-bases and knowledge on gene functions can be extracted from gene …

Classification and Clustering on Microarray Data for Gene Functional Prediction Using R

LL Kleine, R Montaño, F Torres-Avilés - Microarray Data Analysis: Methods …, 2016 - Springer
Gene expression data (microarrays and RNA-sequencing data) as well as other kinds of
genomic data can be extracted from publicly available genomic data. Here, we explain how …