[HTML][HTML] How genomics can help biodiversity conservation
The availability of public genomic resources can greatly assist biodiversity assessment,
conservation, and restoration efforts by providing evidence for scientifically informed …
conservation, and restoration efforts by providing evidence for scientifically informed …
Cis-regulatory sequences in plants: their importance, discovery, and future challenges
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …
function to coordinate responses to developmental and environmental cues is of paramount …
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
We report de novo genome assemblies, transcriptomes, annotations, and methylomes for
the 26 inbreds that serve as the founders for the maize nested association mapping …
the 26 inbreds that serve as the founders for the maize nested association mapping …
Structural evolution drives diversification of the large LRR‐RLK gene family
Summary● Cells are continuously exposed to chemical signals that they must discriminate
between and respond to appropriately. In embryophytes, the leucine‐rich repeat receptor …
between and respond to appropriately. In embryophytes, the leucine‐rich repeat receptor …
Mutator transposon insertions within maize genes often provide a novel outward reading promoter
The highly active family of Mutator (Mu) DNA transposons has been widely used for forward
and reverse genetics in maize. There are examples of Mu-suppressible alleles that result in …
and reverse genetics in maize. There are examples of Mu-suppressible alleles that result in …
Transcriptome profiling of maize transcription factor mutants to probe gene regulatory network predictions
Transcription factors play important roles in regulation of gene expression and phenotype. A
variety of approaches have been utilized to develop gene regulatory networks to predict the …
variety of approaches have been utilized to develop gene regulatory networks to predict the …
[PDF][PDF] Leveraging histone modifications to improve genome annotations
Accurate genome annotations are essential to modern biology; however, they remain
challenging to produce. Variation in gene structure and expression across species, as well …
challenging to produce. Variation in gene structure and expression across species, as well …
The Complete Genome Sequence and Structure of the Oleaginous Rhodococcus opacus Strain PD630 Through Nanopore Technology
A Firrincieli, B Grigoriev, H Dostálová… - … in Bioengineering and …, 2022 - frontiersin.org
Rhodococcus bacterial strains are characterized by wide metabolic versatility and
extraordinary resistance to environmental stresses (de Carvalho et al., 2014; Orro et al …
extraordinary resistance to environmental stresses (de Carvalho et al., 2014; Orro et al …
Non‐homology‐based prediction of gene functions in maize (Zea mays ssp. mays)
Advances in genome sequencing and annotation have eased the difficulty of identifying new
gene sequences. Predicting the functions of these newly identified genes remains …
gene sequences. Predicting the functions of these newly identified genes remains …
Fishing for a reelGene: evaluating gene models with evolution and machine learning
Assembled genomes and their associated annotations have transformed our study of gene
function. However, each new assembly generates new gene models. Inconsistencies …
function. However, each new assembly generates new gene models. Inconsistencies …