TET (Ten-eleven translocation) family proteins: structure, biological functions and applications

X Zhang, Y Zhang, C Wang, X Wang - Signal Transduction and …, 2023 - nature.com
Ten-eleven translocation (TET) family proteins (TETs), specifically, TET1, TET2 and TET3,
can modify DNA by oxidizing 5-methylcytosine (5mC) iteratively to yield 5 …

Denaturing purifications demonstrate that PRC2 and other widely reported chromatin proteins do not appear to bind directly to RNA in vivo

JK Guo, MR Blanco, WG Walkup, G Bonesteele… - Molecular cell, 2024 - cell.com
Summary Polycomb repressive complex 2 (PRC2) is reported to bind to many RNAs and
has become a central player in reports of how long non-coding RNAs (lncRNAs) regulate …

[HTML][HTML] H3K27me3-mediated epigenetic regulation in pluripotency maintenance and lineage differentiation

L Jiang, L Huang, W Jiang - Cell Insight, 2024 - Elsevier
Cell fate determination is an intricate process which is orchestrated by multiple regulatory
layers including signal pathways, transcriptional factors, epigenetic modifications, and …

METTL14 regulates chromatin bivalent domains in mouse embryonic stem cells

M Mu, X Li, L Dong, J Wang, Q Cai, Y Hu, D Wang… - Cell reports, 2023 - cell.com
Summary METTL14 (methyltransferase-like 14) is an RNA-binding protein that partners with
METTL3 to mediate N 6-methyladenosine (m 6 A) methylation. Recent studies identified a …

ZFP281 controls transcriptional and epigenetic changes promoting mouse pluripotent state transitions via DNMT3 and TET1

X Huang, S Balmer, C Lyu, Y Xiang, V Malik, H Wang… - Developmental Cell, 2024 - cell.com
The progression from naive through formative to primed in vitro pluripotent stem cell states
recapitulates epiblast development in vivo during the peri-implantation period of mouse …

Role of RNA binding proteins of the Drosophila behavior and human splicing (DBHS) family in health and cancer

T Takeiwa, K Ikeda, K Horie, S Inoue - RNA biology, 2024 - Taylor & Francis
ABSTRACT RNA-binding proteins (RBPs) play crucial roles in the functions and
homoeostasis of various tissues by regulating multiple events of RNA processing including …

PROSER1 modulates DNA demethylation through dual mechanisms to prevent syndromic developmental malformations

A Fleming, EV Knatko, X Li, A Zoch… - Genes & …, 2024 - genesdev.cshlp.org
The link between DNA methylation and neurodevelopmental disorders is well established.
However, how DNA methylation is fine-tuned—ensuring precise gene expression and …

[HTML][HTML] The lncRNA Neat1 is associated with astrocyte reactivity and memory deficits in a mouse model of Alzheimer's disease

AB Irwin, V Martina, SCS Jago, R Bahabry… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Dysregulation of long non-coding RNAs (lncRNAs) have been associated with Alzheimer's
disease (AD). However, the functional role of lncRNAs in AD remains unclear. Here, we …

TET1 Catalytic activity is required for reprogramming of imprinting control regions and patterning of sperm-specific hypomethylated regions

RD Prasasya, BA Caldwell, Z Liu, S Wu, NA Leu… - bioRxiv, 2023 - biorxiv.org
SUMMARY DNA methylation erasure is required for mammalian primordial germ cell
reprogramming. TET enzymes iteratively oxidize 5-methylcytosine to generate 5 …

The RNA binding protein LIN28A mediates chromatin dynamics during neuronal differentiation

S Piscitelli, E Cascone, C D'Ambrosio, G Divisato… - bioRxiv, 2024 - biorxiv.org
The transition of embryonic stem cells (ESCs) from pluripotency to lineage commitment is
regulated by multiple mechanisms, including chromatin dynamics and both transcriptional …