Rapid in situ identification of biological specimens via DNA amplicon sequencing using miniaturized laboratory equipment
In many parts of the world, human-mediated environmental change is depleting biodiversity
faster than it can be characterized, while invasive species cause agricultural damage …
faster than it can be characterized, while invasive species cause agricultural damage …
Real‐time genomics for One Health
The ongoing degradation of natural systems and other environmental changes has put our
society at a crossroad with respect to our future relationship with our planet. While the …
society at a crossroad with respect to our future relationship with our planet. While the …
ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone
Background DNA barcodes are a useful tool for discovering, understanding, and monitoring
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …
Identification of plastic-associated species in the Mediterranean Sea using DNA metabarcoding with Nanopore MinION
K Davidov, E Iankelevich-Kounio, I Yakovenko… - Scientific reports, 2020 - nature.com
Plastic debris in the ocean form a new ecosystem, termed 'plastisphere', which hosts a
variety of marine organisms. Recent studies implemented DNA metabarcoding to …
variety of marine organisms. Recent studies implemented DNA metabarcoding to …
Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing
Background More than 80% of all animal species remain unknown to science. Most of these
species live in the tropics and belong to animal taxa that combine small body size with high …
species live in the tropics and belong to animal taxa that combine small body size with high …
Illuminating entomological dark matter with DNA barcodes in an era of insect decline, deep learning, and genomics
R Meier, MKN Lawniczak… - Annual Review of …, 2024 - annualreviews.org
Most insects encountered in the field are initially entomological dark matter in that they
cannot be identified to species while alive. This explains the enduring quest for efficient …
cannot be identified to species while alive. This explains the enduring quest for efficient …
Coexistence of blaNDM–5 and tet(X4) in international high-risk Escherichia coli clone ST648 of human origin in China
The emergence of pathogens is conferring resistance to last-resort therapies such as
tigecycline, colistin, and carbapenems, limiting the therapeutic options, and raising concerns …
tigecycline, colistin, and carbapenems, limiting the therapeutic options, and raising concerns …
Genetic biomonitoring and biodiversity assessment using portable sequencing technologies: current uses and future directions
We live in an era of unprecedented biodiversity loss, affecting the taxonomic composition of
ecosystems worldwide. The immense task of quantifying human imprints on global …
ecosystems worldwide. The immense task of quantifying human imprints on global …
Oxford Nanopore sequencing: new opportunities for plant genomics?
DNA sequencing was dominated by Sanger's chain termination method until the mid-2000s,
when it was progressively supplanted by new sequencing technologies that can generate …
when it was progressively supplanted by new sequencing technologies that can generate …
Potential of meta-omics to provide modern microbial indicators for monitoring soil quality and securing food production
Soils are fundamental resources for agricultural production and play an essential role in
food security. They represent the keystone of the food value chain because they harbor a …
food security. They represent the keystone of the food value chain because they harbor a …