Biomolecular condensates in kidney physiology and disease

G Gao, ES Sumrall, S Pitchiaya, M Bitzer… - Nature Reviews …, 2023 - nature.com
The regulation and preservation of distinct intracellular and extracellular solute
microenvironments is crucial for the maintenance of cellular homeostasis. In mammals, the …

The tail that wags the dog: how the disordered C-terminal domain controls the transcriptional activities of the p53 tumor-suppressor protein

O Laptenko, DR Tong, J Manfredi, C Prives - Trends in biochemical …, 2016 - cell.com
The p53 tumor suppressor is a transcription factor (TF) that exerts antitumor functions
through its ability to regulate the expression of multiple genes. Within the p53 protein resides …

Evolution of intrinsic disorder in eukaryotic proteins

JB Ahrens, J Nunez-Castilla… - Cellular and Molecular …, 2017 - Springer
Conformational flexibility conferred though regions of intrinsic structural disorder allows
proteins to behave as dynamic molecules. While it is well-known that intrinsically disordered …

Evidence for a strong correlation between transcription factor protein disorder and organismic complexity

I Yruela, CJ Oldfield, KJ Niklas… - Genome biology and …, 2017 - academic.oup.com
Studies of diverse phylogenetic lineages reveal that protein disorder increases in concert
with organismic complexity but that differences nevertheless exist among lineages. To gain …

Roadmap to the study of gene and protein phylogeny and evolution—A practical guide

F Jacques, P Bolivar, K Pietras, EU Hammarlund - Plos one, 2023 - journals.plos.org
Developments in sequencing technologies and the sequencing of an ever-increasing
number of genomes have revolutionised studies of biodiversity and organismal evolution …

Evolution of the p53-MDM2 pathway

E Åberg, F Saccoccia, M Grabherr, WYJ Ore… - BMC Evolutionary …, 2017 - Springer
Background The p53 signalling pathway, which controls cell fate, has been extensively
studied due to its prominent role in tumor development. The pathway includes the tumor …

Shaping the regulation of the p53 mRNA tumour suppressor: the co-evolution of genetic signatures

K Karakostis, R Fåhraeus - BMC cancer, 2019 - Springer
Structured RNA regulatory motifs exist from the prebiotic stages of the RNA world to the
more complex eukaryotic systems. In cases where a functional RNA structure is within the …

Phylogenetic analysis of the MCL1 BH3 binding groove and rBH3 sequence motifs in the p53 and INK4 protein families

A McGriff, WJ Placzek - Plos one, 2023 - journals.plos.org
B-cell lymphoma 2 (Bcl-2) proteins are central, conserved regulators of apoptosis. Bcl-2
family function is regulated by binding interactions between the Bcl-2 homology 3 (BH3) …

Characterization of p53 family homologs in evolutionary remote branches of holozoa

M Bartas, V Brázda, J Červeň, P Pečinka - International Journal of …, 2019 - mdpi.com
The p53 family of transcription factors plays key roles in development, genome stability,
senescence and tumor development, and p53 is the most important tumor suppressor …

Evolutionary approach of intrinsically disordered CIP/KIP proteins

M Fahmi, M Ito - Scientific reports, 2019 - nature.com
The mammalian CIP/KIP family proteins are intrinsically disordered proteins (IDPs) that can
regulate various cellular processes. However, many reports have shown that IDPs generally …