D'ya like dags? a survey on structure learning and causal discovery

MJ Vowels, NC Camgoz, R Bowden - ACM Computing Surveys, 2022 - dl.acm.org
Causal reasoning is a crucial part of science and human intelligence. In order to discover
causal relationships from data, we need structure discovery methods. We provide a review …

Application of graph theory for identifying connectivity patterns in human brain networks: a systematic review

FV Farahani, W Karwowski, NR Lighthall - frontiers in Neuroscience, 2019 - frontiersin.org
Background: Analysis of the human connectome using functional magnetic resonance
imaging (fMRI) started in the mid-1990s and attracted increasing attention in attempts to …

Survey and evaluation of causal discovery methods for time series

CK Assaad, E Devijver, E Gaussier - Journal of Artificial Intelligence …, 2022 - jair.org
We introduce in this survey the major concepts, models, and algorithms proposed so far to
infer causal relations from observational time series, a task usually referred to as causal …

Multimodal population brain imaging in the UK Biobank prospective epidemiological study

KL Miller, F Alfaro-Almagro, NK Bangerter… - Nature …, 2016 - nature.com
Medical imaging has enormous potential for early disease prediction, but is impeded by the
difficulty and expense of acquiring data sets before symptom onset. UK Biobank aims to …

Braingb: a benchmark for brain network analysis with graph neural networks

H Cui, W Dai, Y Zhu, X Kan, AAC Gu… - IEEE transactions on …, 2022 - ieeexplore.ieee.org
Mapping the connectome of the human brain using structural or functional connectivity has
become one of the most pervasive paradigms for neuroimaging analysis. Recently, Graph …

Brain network transformer

X Kan, W Dai, H Cui, Z Zhang… - Advances in Neural …, 2022 - proceedings.neurips.cc
Human brains are commonly modeled as networks of Regions of Interest (ROIs) and their
connections for the understanding of brain functions and mental disorders. Recently …

Toward naturalistic neuroscience: Mechanisms underlying the flattening of brain hierarchy in movie-watching compared to rest and task

ML Kringelbach, YS Perl, E Tagliazucchi, G Deco - Science Advances, 2023 - science.org
Identifying the functional specialization of the brain has moved from using cognitive tasks
and resting state to using ecological relevant, naturalistic movies. We leveraged a large …

On the nature and use of models in network neuroscience

DS Bassett, P Zurn, JI Gold - Nature Reviews Neuroscience, 2018 - nature.com
Network theory provides an intuitively appealing framework for studying relationships
among interconnected brain mechanisms and their relevance to behaviour. As the space of …

The human connectome project's neuroimaging approach

MF Glasser, SM Smith, DS Marcus… - Nature …, 2016 - nature.com
Noninvasive human neuroimaging has yielded many discoveries about the brain. Numerous
methodological advances have also occurred, though inertia has slowed their adoption. This …

Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example

A Abraham, MP Milham, A Di Martino, RC Craddock… - NeuroImage, 2017 - Elsevier
Abstract Resting-state functional Magnetic Resonance Imaging (R-fMRI) holds the promise
to reveal functional biomarkers of neuropsychiatric disorders. However, extracting such …