What are higher-order networks?

C Bick, E Gross, HA Harrington, MT Schaub - SIAM Review, 2023 - SIAM
Network-based modeling of complex systems and data using the language of graphs has
become an essential topic across a range of different disciplines. Arguably, this graph-based …

Revealing key structural features hidden in liquids and glasses

H Tanaka, H Tong, R Shi, J Russo - Nature Reviews Physics, 2019 - nature.com
A great success of solid state physics comes from the characterization of crystal structures in
the reciprocal (wave vector) space. The power of structural characterization in Fourier space …

[图书][B] Computational topology for data analysis

TK Dey, Y Wang - 2022 - books.google.com
" In this chapter, we introduce some of the very basics that are used throughout the book.
First, we give the definition of a topological space and related notions of open and closed …

[PDF][PDF] A roadmap for the computation of persistent homology

N Otter, MA Porter, U Tillmann, P Grindrod… - EPJ Data Science, 2017 - Springer
Persistent homology (PH) is a method used in topological data analysis (TDA) to study
qualitative features of data that persist across multiple scales. It is robust to perturbations of …

[图书][B] Topological data analysis with applications

G Carlsson, M Vejdemo-Johansson - 2021 - books.google.com
The continued and dramatic rise in the size of data sets has meant that new methods are
required to model and analyze them. This timely account introduces topological data …

Persistent-homology-based machine learning: a survey and a comparative study

CS Pun, SX Lee, K Xia - Artificial Intelligence Review, 2022 - Springer
A suitable feature representation that can both preserve the data intrinsic information and
reduce data complexity and dimensionality is key to the performance of machine learning …

Sliced Wasserstein kernel for persistence diagrams

M Carriere, M Cuturi, S Oudot - International conference on …, 2017 - proceedings.mlr.press
Persistence diagrams (PDs) play a key role in topological data analysis (TDA), in which they
are routinely used to describe succinctly complex topological properties of complicated …

An introduction to multiparameter persistence

MB Botnan, M Lesnick - arXiv preprint arXiv:2203.14289, 2022 - arxiv.org
In topological data analysis (TDA), one often studies the shape of data by constructing a
filtered topological space, whose structure is then examined using persistent homology …

Revisiting point defects in ionic solids and semiconductors

R De Souza, G Harrington - Nature Materials, 2023 - nature.com
The study of point defects in non-metallic crystals has become relevant for an increasing
number of materials applications. Progress requires a foundation of consistent definitions …

Persistent homology analysis for materials research and persistent homology software: HomCloud

I Obayashi, T Nakamura, Y Hiraoka - journal of the physical society of …, 2022 - journals.jps.jp
This paper introduces persistent homology, which is a powerful tool to characterize the
shape of data using the mathematical concept of topology. We explain the fundamental idea …