Protein–protein interaction and quaternary structure
Protein–protein recognition plays an essential role in structure and function. Specific non-
covalent interactions stabilize the structure of macromolecular assemblies, exemplified in …
covalent interactions stabilize the structure of macromolecular assemblies, exemplified in …
Recent progress and future directions in protein-protein docking
DW Ritchie - Current protein and peptide science, 2008 - ingentaconnect.com
This article gives an overview of recent progress in protein-protein docking and it identifies
several directions for future research. Recent results from the CAPRI blind docking …
several directions for future research. Recent results from the CAPRI blind docking …
COVID-19 spike-host cell receptor GRP78 binding site prediction
Objectives Understanding the novel coronavirus (COVID-19) mode of host cell recognition
may help to fight the disease and save lives. The spike protein of coronaviruses is the main …
may help to fight the disease and save lives. The spike protein of coronaviruses is the main …
The HADDOCK web server for data-driven biomolecular docking
Computational docking is the prediction or modeling of the three-dimensional structure of a
biomolecular complex, starting from the structures of the individual molecules in their free …
biomolecular complex, starting from the structures of the individual molecules in their free …
HADDOCK versus HADDOCK: new features and performance of HADDOCK2. 0 on the CAPRI targets
SJ De Vries, ADJ Van Dijk, M Krzeminski… - Proteins: structure …, 2007 - Wiley Online Library
Here we present version 2.0 of HADDOCK, which incorporates considerable improvements
and new features. HADDOCK is now able to model not only protein–protein complexes but …
and new features. HADDOCK is now able to model not only protein–protein complexes but …
Allosteric communication between protomers of dopamine class A GPCR dimers modulates activation
Y Han, IS Moreira, E Urizar, H Weinstein… - Nature chemical …, 2009 - nature.com
A major obstacle to understanding the functional importance of dimerization between class
AG protein–coupled receptors (GPCRs) has been the methodological limitation in achieving …
AG protein–coupled receptors (GPCRs) has been the methodological limitation in achieving …
Flexible protein–protein docking
AMJJ Bonvin - Current opinion in structural biology, 2006 - Elsevier
Predicting the structure of protein–protein complexes using docking approaches is a difficult
problem whose major challenges include identifying correct solutions, and properly dealing …
problem whose major challenges include identifying correct solutions, and properly dealing …
Prediction of interface residues in protein–protein complexes by a consensus neural network method: test against NMR data
H Chen, HX Zhou - Proteins: Structure, Function, and …, 2005 - Wiley Online Library
The number of structures of protein–protein complexes deposited to the Protein Data Bank is
growing rapidly. These structures embed important information for predicting structures of …
growing rapidly. These structures embed important information for predicting structures of …
Recognition of multivalent histone states associated with heterochromatin by UHRF1 protein
Histone modifications and DNA methylation represent two layers of heritable epigenetic
information that regulate eukaryotic chromatin structure and gene activity. UHRF1 is a …
information that regulate eukaryotic chromatin structure and gene activity. UHRF1 is a …
WeNMR: structural biology on the grid
Abstract The WeNMR (http://www. wenmr. eu) project is a European Union funded
international effort to streamline and automate analysis of Nuclear Magnetic Resonance …
international effort to streamline and automate analysis of Nuclear Magnetic Resonance …