Eukaryotic circular rep-encoding single-stranded DNA (CRESS DNA) viruses: ubiquitous viruses with small genomes and a diverse host range

L Zhao, K Rosario, M Breitbart, S Duffy - Advances in virus research, 2019 - Elsevier
While single-stranded DNA (ssDNA) was once thought to be a relatively rare genomic
architecture for viruses, modern metagenomics sequencing has revealed circular ssDNA …

Small RNA-omics for plant virus identification, virome reconstruction, and antiviral defense characterization

MM Pooggin - Frontiers in microbiology, 2018 - frontiersin.org
RNA interference (RNAi)-based antiviral defense generates small interfering RNAs that
represent the entire genome sequences of both RNA and DNA viruses as well as viroids …

Nanopore-based detection and characterization of yam viruses

D Filloux, E Fernandez, E Loire, L Claude, S Galzi… - Scientific reports, 2018 - nature.com
We here assessed the capability of the MinION sequencing approach to detect and
characterize viruses infecting a water yam plant. This sequencing platform consistently …

Paleovirology of the DNA viruses of eukaryotes

JGN Barreat, A Katzourakis - Trends in Microbiology, 2022 - cell.com
Paleovirology is the study of ancient viruses and how they have coevolved with their hosts.
An increasingly detailed understanding of the diversity, origins, and evolution of the DNA …

The search for resistance to cassava mosaic geminiviruses: how much we have accomplished, and what lies ahead

VN Fondong - Frontiers in plant science, 2017 - frontiersin.org
The cassava mosaic disease (CMD), which occurs in all cassava growing regions of Africa
and the Indian subcontinent, is caused by cassava mosaic geminiviruses (CMGs). CMGs are …

Truly ubiquitous CRESS DNA viruses scattered across the eukaryotic tree of life

L Zhao, E Lavington, S Duffy - Journal of Evolutionary Biology, 2021 - academic.oup.com
Until recently, most viruses detected and characterized were of economic significance,
associated with agricultural and medical diseases. This was certainly true for the eukaryote …

Viruses of Yams (Dioscorea spp.): Current Gaps in Knowledge and Future Research Directions to Improve Disease Management

MB Diouf, R Festus, G Silva, S Guyader, M Umber… - Viruses, 2022 - mdpi.com
Viruses are a major constraint for yam production worldwide. They hamper the conservation,
movement, and exchange of yam germplasm and are a threat to food security in tropical and …

ssDNA viruses: key players in global virome

VG Malathi, P Renuka Devi - Virusdisease, 2019 - Springer
Single-stranded (ss) DNA viruses are extremely widespread, infect diverse hosts from all
three domains of life and include important pathogens. Most ssDNA viruses possess small …

[HTML][HTML] An endogenous DNA virus in an amphibian-killing fungus associated with pathogen genotype and virulence

RA Clemons, MN Yacoub, E Faust, LF Toledo… - Current Biology, 2024 - cell.com
The global panzootic lineage (GPL) of the pathogenic fungus Batrachochytrium
dendrobatidis (Bd) has caused severe amphibian population declines, yet the drivers …

[HTML][HTML] Tissue culture and next-generation sequencing: A combined approach for detecting yam (Dioscorea spp.) viruses

M Bömer, AI Rathnayake, P Visendi, SO Sewe… - … and molecular plant …, 2019 - Elsevier
In vitro culture offers many advantages for yam germplasm conservation, propagation and
international distribution. However, low virus titres in the generated tissues pose a challenge …