Explore protein conformational space with variational autoencoder

H Tian, X Jiang, F Trozzi, S Xiao… - Frontiers in molecular …, 2021 - frontiersin.org
Molecular dynamics (MD) simulations have been actively used in the study of protein
structure and function. However, extensive sampling in the protein conformational space …

Prediction of residue-specific contributions to binding and thermal stability using yeast surface display

S Ahmed, M Bhasin, K Manjunath… - Frontiers in Molecular …, 2022 - frontiersin.org
Accurate prediction of residue burial as well as quantitative prediction of residue-specific
contributions to protein stability and activity is challenging, especially in the absence of …

Elucidating the molecular determinants of Aβ aggregation with deep mutational scanning

VE Gray, K Sitko, FZN Kameni… - G3: Genes …, 2019 - academic.oup.com
Despite the importance of Aβ aggregation in Alzheimer's disease etiology, our
understanding of the sequence determinants of aggregation is sparse and largely derived …

In-silico validation and fabrication of matrix diffusion-based polymeric transdermal patches for repurposing gabapentin hydrochloride in neuropathic pain

M Singh, S Agarwal, P Pancham… - CNS & Neurological …, 2021 - ingentaconnect.com
Background: Gabapentin (GBP) is an FDA-approved drug for the treatment of partial and
secondary generalized seizures, apart from being used for diabetic neuropathic pain. GBP …

[PDF][PDF] This file includes

S Ahmed, K Manjunath, R Varadarajan - scholar.archive.org
Quantitative prediction of residue-specific contributions to protein stability and activity is
challenging, especially in the absence of experimental structural information. This is …