Statistical connectomics

J Chung, E Bridgeford, J Arroyo… - Annual Review of …, 2021 - annualreviews.org
The data science of networks is a rapidly developing field with myriad applications. In
neuroscience, the brain is commonly modeled as a connectome, a network of nodes …

Unifying pairwise interactions in complex dynamics

OM Cliff, AG Bryant, JT Lizier, N Tsuchiya… - Nature Computational …, 2023 - nature.com
Scientists have developed hundreds of techniques to measure the interactions between
pairs of processes in complex systems, but these computational methods—from …

[HTML][HTML] dcor: distance correlation and energy statistics in Python

C Ramos-Carreño, JL Torrecilla - SoftwareX, 2023 - Elsevier
This article presents dcor, an open-source Python package dedicated to distance correlation
and other statistics related to energy distance. These energy statistics include distances …

Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics

EW Bridgeford, S Wang, Z Wang, T Xu… - PLoS computational …, 2021 - journals.plos.org
Replicability, the ability to replicate scientific findings, is a prerequisite for scientific discovery
and clinical utility. Troublingly, we are in the midst of a replicability crisis. A key to …

Learning sources of variability from high-dimensional observational studies

EW Bridgeford, J Chung, B Gilbert, S Panda… - arXiv preprint arXiv …, 2023 - arxiv.org
Causal inference studies whether the presence of a variable influences an observed
outcome. As measured by quantities such as the" average treatment effect," this paradigm is …

Improved distance correlation estimation

BE Monroy-Castillo, MA Jácome, R Cao - Applied Intelligence, 2025 - Springer
Distance correlation is a novel class of multivariate dependence measure, taking positive
values between 0 and 1, and applicable to random vectors of not necessarily equal arbitrary …

DSM: Deep sequential model for complete neuronal morphology representation and feature extraction

F Xiong, P Xie, Z Zhao, Y Li, S Zhao, L Manubens-Gil… - Patterns, 2024 - cell.com
The full morphology of single neurons is indispensable for understanding cell types, the
basic building blocks in brains. Projecting trajectories are critical to extracting biologically …

Universally consistent K-sample tests via dependence measures

S Panda, C Shen, R Perry, J Zorn, A Lutz… - Statistics & Probability …, 2025 - Elsevier
The K-sample testing problem involves determining whether K groups of data points are
each drawn from the same distribution. Analysis of variance is arguably the most classical …

Standardizing human brain parcellations

PE Myers, GC Arvapalli, SC Ramachandran, DA Pisner… - Biorxiv, 2019 - biorxiv.org
Using brain atlases to localize regions of interest is a required for making neuroscientifically
valid statistical inferences. These atlases, represented in volumetric or surface coordinate …

Valid two‐sample graph testing via optimal transport procrustes and multiscale graph correlation with applications in connectomics

J Chung, B Varjavand, J Arroyo‐Relión, A Alyakin… - Stat, 2022 - Wiley Online Library
Testing whether two graphs come from the same distribution is of interest in many real‐world
scenarios, including brain network analysis. Under the random dot product graph model, the …