[HTML][HTML] Phase Separation Mediated Sub-Nuclear Compartmentalization of Androgen Receptors

S Yavuz, TE Abraham, AB Houtsmuller, ME van Royen - Cells, 2024 - mdpi.com
The androgen receptor (AR), a member of the nuclear steroid hormone receptor family of
transcription factors, plays a crucial role not only in the development of the male phenotype …

Three-dimensional chromatin reorganization regulates B cell development during ageing

F Ma, Y Cao, H Du, FZ Braikia, L Zong… - Nature Cell …, 2024 - nature.com
The contribution of three-dimensional genome organization to physiological ageing is not
well known. Here we show that large-scale chromatin reorganization distinguishes young …

Regulation of T helper cell differentiation by the interplay between histone modification and chromatin interaction

S Liu, Y Cao, K Cui, G Ren, T Zhao, X Wang, D Wei… - Immunity, 2024 - cell.com
The development and function of the immune system are controlled by temporospatial gene
expression programs, which are regulated by cis-regulatory elements, chromatin structure …

Utilizing deep learning models for the identification of enhancers and super-enhancers based on genomic and epigenomic features

Z Ahani, M Shahiki Tash… - Journal of Intelligent …, 2024 - content.iospress.com
Super-enhancers are a category of active super-enhancers densely occupied by
transcription factors and chromatin regulators, controlling the expression of disease-related …

TAD border deletion at the Kit locus causes tissue-specific ectopic activation of a neighboring gene

E Kabirova, A Ryzhkova, V Lukyanchikova… - Nature …, 2024 - nature.com
Topologically associated domains (TADs) restrict promoter-enhancer interactions, thereby
maintaining the spatiotemporal pattern of gene activity. However, rearrangements of the …

TAD‐dependent sub‐TAD is required for enhancer–promoter interaction enabling the β‐globin transcription

D Lee, J Kang, AR Kim - The FASEB Journal, 2024 - Wiley Online Library
Topologically associating domains (TADs) are chromatin domains in the eukaryotic genome.
TADs often comprise several sub‐TADs. The boundaries of TADs and sub‐TADs are …

Optimal CXCR5 Expression during Tfh Maturation Involves the Bhlhe40-Pou2af1 Axis

X Zhu, X Chen, Y Cao, C Liu, G Hu, S Ganesan… - bioRxiv, 2024 - biorxiv.org
The pair of transcription factors Bcl6-Blimp1 is well-known for follicular T helper (Tfh) cell fate
determination, however, the mechanism (s) for Bcl6-independent regulation of CXCR5 …

Chromatin folding motifs define the basic grammar of TAD architecture in single alleles

O Messina, JB Fiche, C Elkhoury Youhanna, G Ganesh… - bioRxiv, 2024 - biorxiv.org
Chromatin structure varies dramatically among single cells, yet the specific motifs
underpinning this organization remain poorly understood. Using imaging-based spatial …

Dynamique transcriptionnelle et remodelage chromatinien lors de la spermatogenèse: rôle de la marque H3K79me2 et de sa méthyltransférase DOT1L

M Coulée - 2023 - theses.hal.science
La spermatogenèse est le processus de différenciation des cellules germinales mâles en
spermatozoïdes. Elle est divisée en trois phases-la prolifération des spermatogonies, la …