Role of transcription factors in peripheral nerve regeneration

S Patodia, G Raivich - Frontiers in molecular neuroscience, 2012 - frontiersin.org
Following axotomy, the activation of multiple intracellular signaling cascades causes the
expression of a cocktail of regeneration-associated transcription factors which interact with …

Systems biology of JAK-STAT signalling in human malignancies

J Vera, K Rateitschak, F Lange, C Kossow… - Progress in biophysics …, 2011 - Elsevier
Originally implicated in the regulation of survival, proliferation and differentiation of
haematopoietic cells, the JAK-STAT pathway has also been linked to developmental …

Multi-Scale Modeling Predicts a Balance of Tumor Necrosis Factor-α and Interleukin-10 Controls the Granuloma Environment during Mycobacterium tuberculosis …

NA Cilfone, CR Perry, DE Kirschner, JJ Linderman - PloS one, 2013 - journals.plos.org
Interleukin-10 (IL-10) and tumor necrosis factor-α (TNF-α) are key anti-and pro-inflammatory
mediators elicited during the host immune response to Mycobacterium tuberculosis (Mtb) …

Systems biology of IL-6, IL-12 family cytokines

A Dittrich, W Hessenkemper, F Schaper - Cytokine & Growth Factor …, 2015 - Elsevier
Interleukin-6-type cytokines play important roles in the communication between cells of
multicellular organisms. They are involved in the regulation of complex cellular processes …

Mathematical modeling of pro-and anti-inflammatory signaling in macrophages

S Maiti, W Dai, RC Alaniz, J Hahn, A Jayaraman - Processes, 2014 - mdpi.com
Inflammation is a beneficial mechanism that is usually triggered by injury or infection and is
designed to return the body to homeostasis. However, uncontrolled or sustained …

Mathematical Modeling and Parameter Estimation of Intracellular Signaling Pathway: Application to LPS-induced NFκB Activation and TNFα Production in …

D Lee, Y Ding, A Jayaraman, JS Kwon - Processes, 2018 - mdpi.com
Due to the intrinsic stochasticity, the signaling dynamics in a clonal population of cells
exhibit cell-to-cell variability at the single-cell level, which is distinct from the population …

Computational models in inflammatory bowel disease

P Pinton - Clinical and Translational Science, 2022 - Wiley Online Library
Inflammatory bowel disease (IBD) is a chronic and relapsing disease with multiple
underlying influences and notable heterogeneity among its clinical and response‐to …

Optimal experimental design for parameter estimation of an IL-6 signaling model

A Sinkoe, J Hahn - Processes, 2017 - mdpi.com
IL-6 signaling plays an important role in inflammatory processes in the body. While a
number of models for IL-6 signaling are available, the parameters associated with these …

A Multiscale Model of Interleukin‐6–Mediated Immune Regulation in Crohn's Disease and Its Application in Drug Discovery and Development

G Dwivedi, L Fitz, M Hegen, SW Martin… - CPT …, 2014 - Wiley Online Library
In this study, we have developed a multiscale systems model of interleukin (IL)‐6–mediated
immune regulation in Crohn's disease, by integrating intracellular signaling with organ‐level …

An integrated numerical and experimental framework for modeling of CTB and GD1b ganglioside binding kinetics

D Lee, A Singla, HJ Wu, JSI Kwon - AIChE Journal, 2018 - Wiley Online Library
A mathematical model is developed and validated for a multistep binding process between
cholera toxin subunit B (CTB) and GD1b receptors that precedes cholera infection. To study …