Genomic complexity of multiple myeloma and its clinical implications

S Manier, KZ Salem, J Park, DA Landau… - Nature reviews Clinical …, 2017 - nature.com
Multiple myeloma (MM) is a genetically complex disease that evolves from pre-malignant
stages, such as monoclonal gammaopathy of undetermined significance and smouldering …

Glioblastoma: pathology, molecular mechanisms and markers

K Aldape, G Zadeh, S Mansouri, G Reifenberger… - Acta …, 2015 - Springer
Recent advances in genomic technology have led to a better understanding of key
molecular alterations that underlie glioblastoma (GBM). The current WHO-based …

[HTML][HTML] Genomic and functional approaches to understanding cancer aneuploidy

AM Taylor, J Shih, G Ha, GF Gao, X Zhang, AC Berger… - Cancer cell, 2018 - cell.com
Aneuploidy, whole chromosome or chromosome arm imbalance, is a near-universal
characteristic of human cancers. In 10,522 cancer genomes from The Cancer Genome Atlas …

Primary Resistance to PD-1 Blockade Mediated by JAK1/2 Mutations

DS Shin, JM Zaretsky, H Escuin-Ordinas, A Garcia-Diaz… - Cancer discovery, 2017 - AACR
Loss-of-function mutations in JAK1/2 can lead to acquired resistance to anti-programmed
death protein 1 (PD-1) therapy. We reasoned that they may also be involved in primary …

A new genomic framework to categorize pediatric acute myeloid leukemia

M Umeda, J Ma, T Westover, Y Ni, G Song… - Nature Genetics, 2024 - nature.com
Recent studies on pediatric acute myeloid leukemia (pAML) have revealed pediatric-specific
driver alterations, many of which are underrepresented in the current classification schemas …

Longitudinal molecular trajectories of diffuse glioma in adults

FP Barthel, KC Johnson, FS Varn, AD Moskalik… - Nature, 2019 - nature.com
The evolutionary processes that drive universal therapeutic resistance in adult patients with
diffuse glioma remain unclear,. Here we analysed temporally separated DNA-sequencing …

[HTML][HTML] Comprehensive molecular profiling of lung adenocarcinoma

Cancer Genome Atlas Research Network - Nature, 2014 - ncbi.nlm.nih.gov
Adenocarcinoma of the lung is the leading cause of cancer death worldwide. Here we report
molecular profiling of 230 resected lung adenocarcinomas using messenger RNA …

Perturbation-response genes reveal signaling footprints in cancer gene expression

M Schubert, B Klinger, M Klünemann, A Sieber… - Nature …, 2018 - nature.com
Aberrant cell signaling can cause cancer and other diseases and is a focal point of drug
research. A common approach is to infer signaling activity of pathways from gene …

Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas

Y Hou, H Guo, C Cao, X Li, B Hu, P Zhu, X Wu, L Wen… - Cell research, 2016 - nature.com
Single-cell genome, DNA methylome, and transcriptome sequencing methods have been
separately developed. However, to accurately analyze the mechanism by which …

Comprehensive molecular profiling of lung adenocarcinoma: The cancer genome atlas research network

E Collisson, J Campbell, A Brooks, A Berger, W Lee… - Nature, 2014 - espace.curtin.edu.au
Adenocarcinoma of the lung is the leading cause of cancer death worldwide. Here we report
molecular profiling of 230 resected lung adenocarcinomas using messenger RNA …