[HTML][HTML] Lignocellulose degradation by rumen bacterial communities: New insights from metagenome analyses

J Gharechahi, MF Vahidi, G Sharifi, S Ariaeenejad… - Environmental …, 2023 - Elsevier
Ruminant animals house a dense and diverse community of microorganisms in their rumen,
an enlarged compartment in their stomach, which provides a supportive environment for the …

The formate bio-economy

O Yishai, SN Lindner, JG de la Cruz… - Current Opinion in …, 2016 - Elsevier
Highlights•Formate is an ideal mediator between the physicochemical and biological
realms.•Formate can be efficiently produced from various highly available …

A widespread bacterial protein compartment sequesters and stores elemental sulfur

R Benisch, MP Andreas, TW Giessen - Science Advances, 2024 - science.org
Subcellular compartments often serve to store nutrients or sequester labile or toxic
compounds. As bacteria mostly do not possess membrane-bound organelles, they often …

A machine learning approach to integrate big data for precision medicine in acute myeloid leukemia

SI Lee, S Celik, BA Logsdon, SM Lundberg… - Nature …, 2018 - nature.com
Cancers that appear pathologically similar often respond differently to the same drug
regimens. Methods to better match patients to drugs are in high demand. We demonstrate a …

Designing biological compartmentalization

AH Chen, PA Silver - Trends in cell biology, 2012 - cell.com
Intracellular organization is a key factor in cell metabolism. Cells have evolved various
organizational systems to solve the challenges of toxic pathway intermediates, competing …

A taxonomy of bacterial microcompartment loci constructed by a novel scoring method

SD Axen, O Erbilgin, CA Kerfeld - PLoS computational biology, 2014 - journals.plos.org
Bacterial microcompartments (BMCs) are proteinaceous organelles involved in both
autotrophic and heterotrophic metabolism. All BMCs share homologous shell proteins but …

Subcellular organization: a critical feature of bacterial cell replication

IV Surovtsev, C Jacobs-Wagner - Cell, 2018 - cell.com
Spatial organization is a hallmark of all living systems. Even bacteria, the smallest forms of
cellular life, display defined shapes and complex internal organization, showcasing a highly …

Modularity of a carbon-fixing protein organelle

W Bonacci, PK Teng, B Afonso… - Proceedings of the …, 2012 - National Acad Sciences
Bacterial microcompartments are proteinaceous complexes that catalyze metabolic
pathways in a manner reminiscent of organelles. Although microcompartment structure is …

Diverse bacterial microcompartment organelles

C Chowdhury, S Sinha, S Chun… - Microbiology and …, 2014 - Am Soc Microbiol
Bacterial microcompartments (MCPs) are sophisticated protein-based organelles used to
optimize metabolic pathways. They consist of metabolic enzymes encapsulated within a …

Spatial organization of enzymes for metabolic engineering

H Lee, WC DeLoache, JE Dueber - Metabolic engineering, 2012 - Elsevier
As synthetic pathways built from exogenous enzymes become more complicated, the
probability of encountering undesired interactions with host organisms increases, thereby …