More than a colour; how pigment influences colourblind microbes

GM Wessel, L Xing, N Oulhen - … Transactions of the …, 2024 - royalsocietypublishing.org
Many animals have pigments when they themselves cannot see colour. Perhaps those
pigments enable the animal to avoid predators, or to attract mates. Maybe even those …

Single-cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome

P Paganos, D Voronov, JM Musser, D Arendt… - Elife, 2021 - elifesciences.org
Identifying the molecular fingerprint of organismal cell types is key for understanding their
function and evolution. Here, we use single-cell RNA sequencing (scRNA-seq) to survey the …

From species to regional and local specialization of intestinal macrophages

C Arroyo Portilla, J Tomas, JP Gorvel… - Frontiers in Cell and …, 2021 - frontiersin.org
Initially intended for nutrient uptake, phagocytosis represents a central mechanism of debris
removal and host defense against invading pathogens through the entire animal kingdom. In …

foxF-1 controls specification of non-body wall muscle and phagocytic cells in planarians

ML Scimone, O Wurtzel, K Malecek, CT Fincher… - Current Biology, 2018 - cell.com
Planarians are flatworms capable of regenerating any missing body part in a process
requiring stem cells and positional information. Muscle is a major source of planarian …

[HTML][HTML] Solute carrier (SLC) expression reveals skeletogenic cell diversity

Y Lee, E Tjeerdema, S Kling, N Chang… - Developmental …, 2023 - Elsevier
Within the developing embryo is a microcosm of cell type diversity. Single cell RNA-
sequencing (scRNA-seq) is used to reveal cell types, typically by grouping cells according to …

Coelomocyte populations in the sea urchin, Strongylocentrotus purpuratus, undergo dynamic changes in response to immune challenge

MA Barela Hudgell, L Grayfer, LC Smith - Frontiers in Immunology, 2022 - frontiersin.org
The sea urchin, Strongylocentrotus purpuratus has seven described populations of distinct
coelomocytes in the coelomic fluid that are defined by morphology, size, and for some types …

microRNA-124 directly suppresses Nodal and Notch to regulate mesodermal development

KD Konrad, M Arnott, M Testa, S Suarez, JL Song - Developmental Biology, 2023 - Elsevier
MicroRNAs regulate gene expression post-transcriptionally by destabilizing and/or inhibiting
translation of target mRNAs in animal cells. MicroRNA-124 (miR-124) has been examined …

Integrative multi-omics increase resolution of the sea urchin posterior gut gene regulatory network at single cell level

D Voronov, P Paganos, MS Magri, C Cuomo… - …, 2024 - journals.biologists.com
Drafting gene regulatory networks (GRNs) requires embryological knowledge pertaining to
the cell type families, information on the regulatory genes, causal data from gene …

Life-stage specificity and temporal variations in transcriptomes and DNA methylomes of the reef coral Pocillopora damicornis in response to thermal acclimation

L Jiang, P Zhang, LT Huang, XL Yu, CY Liu… - Science of The Total …, 2024 - Elsevier
Understanding the acclimation capacity of reef corals across generations to thermal stress
and its underlying molecular underpinnings could provide insights into their resilience and …

Ciliary photoreceptors in sea urchin larvae indicate pan-deuterostome cell type conservation

JE Valencia, R Feuda, DO Mellott, RD Burke, IS Peter - BMC biology, 2021 - Springer
Background The evolutionary history of cell types provides insights into how morphological
and functional complexity arose during animal evolution. Photoreceptor cell types are …