In this paper we present an overview of agent-based models that are used to simulate
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …

Mathematical models are increasingly designed to guide experiments in biology,
biotechnology, as well as to assist in medical decision making. They are in particular …

An overview of the smoothed dissipative particle dynamics (SDPD) method is presented in a
format that tries to quickly answer questions that often arise among users and newcomers. It …

Actin protrusion dynamics plays an important role in the regulation of three-dimensional (3D)
cell migration. Cells form protrusions that adhere to the surrounding extracellular matrix …

Adhesion governs to a large extent the mechanical interaction between a cell and its
microenvironment. As initial cell spreading is purely adhesion driven, understanding this …

Model simulations indicate that the response of growing cell populations on mechanical
stress follows the same functional relationship and is predictable over different cell lines and …

Cell division during early embryogenesis is linked to key morphogenic events such as
embryo symmetry breaking and tissue patterning. It is thought that the physical surrounding …

Implicit integration of the viscous term can significantly improve performance in
computational fluid dynamics for highly viscous fluids such as lava. We show improvements …

Plant based dried food products are popular commodities in global market where much
research is focused to improve the products and processing techniques. In this regard …

We propose viscoelastic smoothed particle hydrodynamics (SPH) with extended boundary
conditions as a new method to model the extracellular matrix (ECM) in contact with a …