[HTML][HTML] Emerging methods in botanical DNA/RNA extraction

N Mitchell, EV McAssey, RGJ Hodel - Applications in Plant …, 2023 - ncbi.nlm.nih.gov
Analyses of nucleic acids (DNA and RNA) have become a staple tool for botanists to answer
questions across a wide variety of disciplines, ranging from population genetics to …

Optimizing the lysis step in CTAB DNA extractions of silica‐dried and herbarium leaf tissues

SJ Carey, LE Becklund, PP Fabre… - Applications in plant …, 2023 - Wiley Online Library
Premise The use of cetyltrimethylammonium bromide (CTAB) is an effective and
inexpensive method of extracting DNA from plants. The CTAB protocol is frequently modified …

[HTML][HTML] Cationic and anionic detergent buffers in sequence yield high-quality genomic DNA from diverse plant species

S Krishnan, S Sasi, P Kodakkattumannil… - Analytical …, 2024 - Elsevier
Because of the heterogeneity among seedlings of outbreeding species, the use of seedling
tissues as a source of DNA is unsuitable for the genomic characterization of elite …

A universal protocol for high-quality DNA and RNA isolation from diverse plant species

F Masoomi-Aladizgeh, L Jabbari, R Khayam Nekouei… - Plos one, 2023 - journals.plos.org
Next-generation sequencing demands high-quality nucleic acid, yet isolating DNA and RNA
is often challenging, particularly from plant tissues. Despite advances in developing various …

Modified CTAB protocols for high‐molecular‐weight DNA extractions from ferns

PJ Xie, YT Ke, LY Kuo - Applications in Plant Sciences, 2023 - Wiley Online Library
Premise Efficient protocols for extracting high‐molecular‐weight (HMW) DNA from ferns
facilitate the long‐read sequencing of their large and complex genomes. Here, we perform …

Effects of low-temperature stress on serum biochemical indicators, intestinal microbiome, and transcriptome of juvenile golden pompano (Trachinotus ovatus)

R Li, E Amenyogbe, Y Lu, J Jin, R Xie, J Huang - Aquaculture International, 2024 - Springer
Low temperatures pose a critical challenge to aquaculture operations, as they can
significantly affect fish health and overall productivity. The study investigated the impact of …

Genome assembly provides insights into the genome evolution of Baccaurea ramiflora Lour.

J Huang, J Chen, M Shi, J Zheng, M Chen, L Wu… - Scientific Reports, 2024 - nature.com
Baccaurea ramiflora Lour., an evergreen tree of the Baccaurea genus of the Phyllanthaceae
family, is primarily distributed in South Asia, Southeast Asia, and southern China, including …

Development of a sensitive, easy and high-throughput compliant protocol for maize and soybean DNA extraction and quantitation using a plant-specific universal …

R Ambra, M Marcelli, F D'Orso - Genes, 2023 - mdpi.com
We report the optimization of a high-throughput, compliant DNA extraction method that uses
standard format 96-well plates and a commercial automated DNA purification system (ABI …

Testing protocols to optimize DNA extraction from tough leaf tissue: A case study in Encephalartos

MM Jones, NS Nagalingum… - Applications in Plant …, 2023 - Wiley Online Library
Premise Plants with stiff, leathery leaves pose a challenge for standard DNA extraction
protocols. These tissues are recalcitrant to mechanical disruption via TissueLyser (or …

CRISPR/Cas9-mediated mutagenesis of FT/TFL1 in petunia improves plant architecture and early flowering

MF Abdulla, K Mostafa, M Kavas - Plant Molecular Biology, 2024 - Springer
Petunias are renowned ornamental species widely cultivated as pot plants for their aesthetic
appeal both indoors and outdoors. The preference for pot plants depends on their compact …