A review of model evaluation metrics for machine learning in genetics and genomics

C Miller, T Portlock, DM Nyaga… - Frontiers in …, 2024 - frontiersin.org
Machine learning (ML) has shown great promise in genetics and genomics where large and
complex datasets have the potential to provide insight into many aspects of disease risk …

Dissecting the genetic architecture of leaf morphology traits in mungbean (Vigna radiata (L.) Wizcek) using genome‐wide association study

KO Chiteri, S Chiranjeevi, TZ Jubery… - The Plant Phenome …, 2023 - Wiley Online Library
Abstract Mungbean (Vigna radiata (L.) Wizcek) is an important pulse crop, increasingly used
as a source of protein, fiber, low fat, carbohydrates, minerals, and bioactive compounds in …

Phenome-wide association study in 25,639 pregnant Chinese women reveals loci associated with maternal comorbidities and child health

J Guo, Q Guo, T Zhong, C Xu, Z Xia, H Fang, Q Chen… - Cell Genomics, 2024 - cell.com
Phenome-wide association studies (PheWAS) have been less focused on maternal
diseases and maternal-newborn comorbidities, especially in the Chinese population. To …

Admixture Mapping of Chronic Kidney Disease and Risk Factors in Hispanic/Latino Individuals From Central America Country of Origin

ARVR Horimoto, Q Sun, JP Lash… - Circulation: Genomic …, 2024 - ahajournals.org
BACKGROUND: Chronic kidney disease (CKD) is highly prevalent in Central America, and
genetic factors may contribute to CKD risk. To understand the influences of genetic …

The use of class imbalanced learning methods on ULSAM data to predict the case–control status in genome-wide association studies

RO Öztornaci, H Syed, AP Morris, B Taşdelen - Journal of Big Data, 2023 - Springer
Abstract Machine learning (ML) methods for uncovering single nucleotide polymorphisms
(SNPs) in genome-wide association study (GWAS) data that can be used to predict disease …

Confirmation of HLA-II associations with TB susceptibility in admixed African samples

D Croock, Y Swart, H Schurz, DC Petersen, M Möller… - medRxiv, 2024 - medrxiv.org
Abstract The International Tuberculosis Host Genetics Consortium (ITHGC) demonstrated
the power of large-scale GWAS analysis across diverse ancestries in identifying tuberculosis …

Genome-Wide Association Study of Growth and Sex Traits Provides Insight into Heritable Mechanisms Underlying Growth Development of Macrobrachium …

M Wang, S Jin, S Liu, H Fu, Y Zhao, L Jiang - Biology, 2023 - mdpi.com
Simple Summary Macrobrachium nipponense is an important economic aquaculture animal,
and due to its delicious taste, it is a popular food in South China. The growth of male and …

Single nucleotide polymorphism data analysis using binary logistics regression model based on HapMap data

A Setiawan, AJ Mose, T Mahatma - AIP Conference Proceedings, 2024 - pubs.aip.org
Genome-wide association study (GWAS) can be used to determine which genes are
associated with certain traits or diseases. This research is to identify which SNP (Single …

“Omics of Disease”: Automation, Weaving, and Capturing

MA Aguilar - 2024 - search.proquest.com
The complex relationship between genetics, metabolites, microvesicles RNAs, and disease
progression is central to biomedical research. This dissertation navigates through the …

[PDF][PDF] Multi-outcome feature selection via anomaly detection autoencoders

A Mapelli - politesi.polimi.it
Whenever external beam radiotherapy is employed on normal tissue to irradiate tumors,
side effects may arise as drawbacks of this non-invasive treatment. In particular, toxicities …