Nuclear structure in cancer cells

D Zink, AH Fischer, JA Nickerson - Nature reviews cancer, 2004 - nature.com
Nuclear architecture—the spatial arrangement of chromosomes and other nuclear
components—provides a framework for organizing and regulating the diverse functional …

High-throughput fluorescence microscopy for systems biology

R Pepperkok, J Ellenberg - Nature reviews Molecular cell biology, 2006 - nature.com
In this post-genomic era, we need to define gene function on a genome-wide scale for
model organisms and humans. The fundamental unit of biological processes is the cell …

The neXtProt knowledgebase in 2020: data, tools and usability improvements

M Zahn-Zabal, PA Michel, A Gateau… - Nucleic Acids …, 2020 - academic.oup.com
Abstract The neXtProt knowledgebase (https://www. nextprot. org) is an integrative resource
providing both data on human protein and the tools to explore these. In order to provide …

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

B Neumann, T Walter, JK Hériché, J Bulkescher… - Nature, 2010 - nature.com
Despite our rapidly growing knowledge about the human genome, we do not know all of the
genes required for some of the most basic functions of life. To start to fill this gap we …

Immunofluorescence and fluorescent-protein tagging show high correlation for protein localization in mammalian cells

C Stadler, E Rexhepaj, VR Singan, RF Murphy… - Nature …, 2013 - nature.com
Imaging techniques such as immunofluorescence (IF) and the expression of fluorescent
protein (FP) fusions are widely used to investigate the subcellular distribution of proteins …

The neXtProt knowledgebase on human proteins: 2017 update

P Gaudet, PA Michel, M Zahn-Zabal… - Nucleic acids …, 2017 - academic.oup.com
The neXtProt human protein knowledgebase (https://www. nextprot. org) continues to add
new content and tools, with a focus on proteomics and genetic variation data. neXtProt now …

High-throughput RNAi screening by time-lapse imaging of live human cells

B Neumann, M Held, U Liebel, H Erfle, P Rogers… - Nature …, 2006 - nature.com
RNA interference (RNAi) is a powerful tool to study gene function in cultured cells.
Transfected cell microarrays in principle allow high-throughput phenotypic analysis after …

Intracellular trafficking pathways and drug delivery: fluorescence imaging of living and fixed cells

P Watson, AT Jones, DJ Stephens - Advanced drug delivery reviews, 2005 - Elsevier
Cellular processes depend on the fidelity of intracellular membrane traffic. Lipids, proteins,
receptor ligands and solute molecules are trafficked to distinct compartments within the cell …

Identification of cholesterol-regulating genes by targeted RNAi screening

F Bartz, L Kern, D Erz, M Zhu, D Gilbert, T Meinhof… - Cell metabolism, 2009 - cell.com
Elevated plasma cholesterol levels are considered responsible for excess cardiovascular
morbidity and mortality. Cholesterol in plasma is tightly controlled by cholesterol within cells …

neXtProt: a knowledge platform for human proteins

L Lane, G Argoud-Puy, A Britan, I Cusin… - Nucleic acids …, 2012 - academic.oup.com
Abstract neXtProt (http://www. nextprot. org/) is a new human protein-centric knowledge
platform. Developed at the Swiss Institute of Bioinformatics (SIB), it aims to help researchers …