R Albert, J Thakar - Wiley Interdisciplinary Reviews: Systems …, 2014 - Wiley Online Library
The biomolecules inside or near cells form a complex interacting system. Cellular phenotypes and behaviors arise from the totality of interactions among the components of …
Given the complexity and interactive nature of biological systems, constructing informative and coherent network models of these systems and subsequently developing efficient …
Computational modeling constitutes a crucial step toward the functional understanding of complex cellular networks. In particular, logical modeling has proven suitable for the …
D Calçada, D Vianello, E Giampieri, C Sala… - Mechanisms of ageing …, 2014 - Elsevier
Aging is a biological process characterized by the progressive functional decline of many interrelated physiological systems. In particular, aging is associated with the development of …
CD4+ T cells orchestrate the adaptive immune response in vertebrates. While both experimental and modeling work has been conducted to understand the molecular genetic …
A Méndez, L Mendoza - PLoS computational biology, 2016 - journals.plos.org
Terminal differentiation of B cells is an essential process for the humoral immune response in vertebrates and is achieved by the concerted action of several transcription factors in …
D Bérenguier, C Chaouiya, PT Monteiro… - … Journal of Nonlinear …, 2013 - pubs.aip.org
The dynamical analysis of large biological regulatory networks requires the development of scalable methods for mathematical modeling. Following the approach initially introduced by …
It is coming nowadays more clear that in order to obtain a unified description of the different mechanisms governing the behavior and causality relations among the various parts of a …
A Cappuccio, P Tieri, F Castiglione - Briefings in bioinformatics, 2016 - academic.oup.com
One of the greatest challenges in biomedicine is to get a unified view of observations made from the molecular up to the organism scale. Towards this goal, multiscale models have …