[HTML][HTML] The force is strong with this epigenome: chromatin structure and mechanobiology

CR Hsia, DP Melters, Y Dalal - Journal of Molecular Biology, 2023 - Elsevier
All life forms sense and respond to mechanical stimuli. Throughout evolution, organisms
develop diverse mechanosensing and mechanotransduction pathways, leading to fast and …

Chromosome territories and the global regulation of the genome

AJ Fritz, N Sehgal, A Pliss, J Xu… - Genes, Chromosomes …, 2019 - Wiley Online Library
Spatial positioning is a fundamental principle governing nuclear processes. Chromatin is
organized as a hierarchy from nucleosomes to Mbp chromatin domains (CD) or topologically …

[HTML][HTML] Combining results from distinct microRNA target prediction tools enhances the performance of analyses

AC Oliveira, LA Bovolenta, PG Nachtigall… - Frontiers in …, 2017 - frontiersin.org
Target prediction is generally the first step toward recognition of bona fide microRNA
(miRNA)-target interactions in living cells. Several target prediction tools are now available …

[HTML][HTML] Epigenetic regulation of gene expression in keratinocytes

VA Botchkarev, MR Gdula, AN Mardaryev… - Journal of investigative …, 2012 - Elsevier
The nucleus is a complex and highly compartmentalized organelle, which undergoes major
organization changes during cell differentiation, allowing cells to become specialized and …

Cajal body function in genome organization and transcriptome diversity

IA Sawyer, D Sturgill, MH Sung, GL Hager… - BioEssays, 2016 - Wiley Online Library
Nuclear bodies contribute to non‐random organization of the human genome and nuclear
function. Using a major prototypical nuclear body, the Cajal body, as an example, we …

[HTML][HTML] Radial organization in the mammalian nucleus

N Crosetto, M Bienko - Frontiers in genetics, 2020 - frontiersin.org
In eukaryotic cells, most of the genetic material is contained within a highly specialized
organelle—the nucleus. A large body of evidence indicates that, within the nucleus …

[HTML][HTML] Factors that affect the formation of chromosomal translocations in cells

RJ Canoy, A Shmakova, A Karpukhina, M Shepelev… - Cancers, 2022 - mdpi.com
Simple Summary Chromosomal translocations are products of the erroneous repair of DNA
double-strand breaks that result in the illegitimate joining of the two broken chromosomal …

[HTML][HTML] Multilevel view on chromatin architecture alterations in cancer

M Gridina, V Fishman - Frontiers in Genetics, 2022 - frontiersin.org
Chromosomes inside the nucleus are not located in the form of linear molecules. Instead,
there is a complex multilevel genome folding that includes nucleosomes packaging …

[HTML][HTML] Isotropic 3D nuclear morphometry of normal, fibrocystic and malignant breast epithelial cells reveals new structural alterations

V Nandakumar, L Kelbauskas, KF Hernandez… - PloS one, 2012 - journals.plos.org
Background Grading schemes for breast cancer diagnosis are predominantly based on
pathologists' qualitative assessment of altered nuclear structure from 2D brightfield …

Chromosomes at work: organization of chromosome territories in the interphase nucleus

AJ Fritz, AR Barutcu, L Martin‐Buley… - Journal of cellular …, 2016 - Wiley Online Library
The organization of interphase chromosomes in chromosome territories (CTs) was first
proposed more than one hundred years ago. The introduction of increasingly sophisticated …