Complexity of the alternative splicing landscape in plants
Alternative splicing (AS) of precursor mRNAs (pre-mRNAs) from multiexon genes allows
organisms to increase their coding potential and regulate gene expression through multiple …
organisms to increase their coding potential and regulate gene expression through multiple …
Establishing Chlamydomonas reinhardtii as an industrial biotechnology host
Microalgae constitute a diverse group of eukaryotic unicellular organisms that are of interest
for pure and applied research. Owing to their natural synthesis of value‐added natural …
for pure and applied research. Owing to their natural synthesis of value‐added natural …
The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in the laboratory
Five versions of the Chlamydomonas reinhardtii reference genome have been produced
over the last two decades. Here we present version 6, bringing significant advances in …
over the last two decades. Here we present version 6, bringing significant advances in …
Intron-containing algal transgenes mediate efficient recombinant gene expression in the green microalga Chlamydomonas reinhardtii
Among green freshwater microalgae, Chlamydomonas reinhardtii has the most
comprehensive and developed molecular toolkit, however, advanced genetic and metabolic …
comprehensive and developed molecular toolkit, however, advanced genetic and metabolic …
Alternative splicing: enhancing ability to cope with stress via transcriptome plasticity
AM Mastrangelo, D Marone, G Laidò, AM De Leonardis… - Plant Science, 2012 - Elsevier
Alternative splicing is a mechanism for the regulation of gene expression that is widespread
in higher eukaryotes. Genome-wide approaches, based on comparison of expressed and …
in higher eukaryotes. Genome-wide approaches, based on comparison of expressed and …
Introns mediate post-transcriptional enhancement of nuclear gene expression in the green microalga Chlamydomonas reinhardtii
Efficient nuclear transgene expression in the green microalga Chlamydomonas reinhardtii is
generally hindered by low transcription rates. Introns can increase transcript abundance by …
generally hindered by low transcription rates. Introns can increase transcript abundance by …
Solanaceae XIPs are plasma membrane aquaporins that facilitate the transport of many uncharged substrates
GP Bienert, MD Bienert, TP Jahn, M Boutry… - The Plant …, 2011 - Wiley Online Library
Major intrinsic proteins (MIPs) transport water and uncharged solutes across membranes in
all kingdoms of life. Recently, an uncharacterized MIP subfamily was identified in the …
all kingdoms of life. Recently, an uncharacterized MIP subfamily was identified in the …
Origin of spliceosomal introns and alternative splicing
In this work we review the current knowledge on the prehistory, origins, and evolution of
spliceosomal introns. First, we briefly outline the major features of the different types of …
spliceosomal introns. First, we briefly outline the major features of the different types of …
Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa
Abstract Background The species Brassica rapa (2n= 20, AA) is an important vegetable and
oilseed crop, and serves as an excellent model for genomic and evolutionary research in …
oilseed crop, and serves as an excellent model for genomic and evolutionary research in …
SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data
We propose a method for predicting splice graphs that enhances curated gene models
using evidence from RNA-Seq and EST alignments. Results obtained using RNA-Seq …
using evidence from RNA-Seq and EST alignments. Results obtained using RNA-Seq …