Metagenomic analysis using phylogenetic placement—a review of the first decade

L Czech, A Stamatakis, M Dunthorn… - Frontiers in …, 2022 - frontiersin.org
Phylogenetic placement refers to a family of tools and methods to analyze, visualize, and
interpret the tsunami of metagenomic sequencing data generated by high-throughput …

Novel oil‐associated bacteria in Arctic seawater exposed to different nutrient biostimulation regimes

FD Davila Aleman, MA Bautista… - Environmental …, 2024 - Wiley Online Library
Abstract The Arctic Ocean is an oligotrophic ecosystem facing escalating threats of oil spills
as ship traffic increases owing to climate change‐induced sea ice retreat. Biostimulation is …

Impacts of sea ice melting procedures on measurements of microbial community structure

EJ Chamberlain, JP Balmonte, A Torstensson… - Elem Sci …, 2022 - online.ucpress.edu
Microorganisms play critical roles in sea ice biogeochemical processes. However, microbes
living within sea ice can be challenging to sample for scientific study. Because most …

[PDF][PDF] Novel oil-associated bacteria in Arctic seawater exposed to different nutrient biostimulation regimes 2

FDD Aleman, MA Bautista, J McCalder… - Environmental …, 2024 - biorxiv.org
Novel oil-associated bacteria in Arctic seawater exposed to different nutrient biostimulation
regimes Page 1 Novel oil-associated bacteria in Arctic seawater exposed to different nutrient 1 …

Unveiling nature's treasures: actinobacteria from Meghalaya's mining sites as sources of bioactive compounds

D Syiemiong, J Rabha - Archives of Microbiology, 2024 - Springer
Coal and sillimanite mining sites present unique ecological niches favoring the growth of
actinobacteria, a group of Gram-positive bacteria known for producing a wide array of …

Bacterial and archaeal DNA from lake sediments

A Vuillemin, MJL Coolen, J Kallmeyer… - … Change Using Lake …, 2023 - Springer
General microbial patterns of biogeography can be established based on sedimentary DNA
(sedDNA) retrieved from diverse inland aquatic ecosystems, provided that certain variable …

[PDF][PDF] Exploring the Co-occurrence of the Two Mangroves Avicennia marina and Rhizophora mucronata in the Red Sea and their Microbiomes

A Baazeem - 2022 - repository.kaust.edu.sa
The mangrove ecosystem is a marginal and complex ecosystem. Mangrove trees can
tolerate heat, desiccation, high salinity, radiation, and anoxic conditions. The physiological …