Seeing is believing: quantifying is convincing: computational image analysis in biology

IF Sbalzarini - Focus on bio-image informatics, 2016 - Springer
Imaging is center stage in biology. Advances in microscopy and labeling techniques have
enabled unprecedented observations and continue to inspire new developments. Efficient …

PPF—A parallel particle filtering library

Ö Demirel, I Smal, WJ Niessen… - IET Conference on …, 2014 - ieeexplore.ieee.org
. We present the parallel particle filtering (PPF) software library, which enables hybrid
shared-memory/distributed-memory parallelization of particle filtering (PF) algorithms …

[HTML][HTML] Variational inference accelerates accurate DNA mixture deconvolution

M Susik, IF Sbalzarini - Forensic Science International: Genetics, 2023 - Elsevier
We investigate a class of DNA mixture deconvolution algorithms based on variational
inference, and we show that this can significantly reduce computational runtimes with little or …

[PDF][PDF] A PARALLEL PARTICLE FILTERING FRAMEWORK FOR MULTI-OBJECT TRACKING IN BIOIMAGING

Particle filters (PF) are key algorithms for object tracking under non-linear, non-Gaussian
dynamics. The high computational cost of particle filters, however, hampers their …

[PDF][PDF] Nonlinear population Monte Carlo methods for bayesian inference

EK Lapteva - 2015 - e-archivo.uc3m.es
In the present work we address the problem of Monte Carlo approximation of posterior
probability distributions and associated integrals in the Bayesian framework. In particular …

[PDF][PDF] Dynamic load balancing in parallel particle methods

Ö Demirel - 2014 - research-collection.ethz.ch
Contemporary scientific simulations require vast computing power to solve complex
problems in natural and life sciences. High-performance computing (HPC) enables fast …