The functions and unique features of long intergenic non-coding RNA

JD Ransohoff, Y Wei, PA Khavari - Nature reviews Molecular cell …, 2018 - nature.com
Long intergenic non-coding RNA (lincRNA) genes have diverse features that distinguish
them from mRNA-encoding genes and exercise functions such as remodelling chromatin …

Evolution to the rescue: using comparative genomics to understand long non-coding RNAs

I Ulitsky - Nature Reviews Genetics, 2016 - nature.com
Long non-coding RNAs (lncRNAs) have emerged in recent years as major players in a
multitude of pathways across species, but it remains challenging to understand which of …

Leveraging base-pair mammalian constraint to understand genetic variation and human disease

PF Sullivan, JRS Meadows, S Gazal, BDN Phan, X Li… - Science, 2023 - science.org
Thousands of genomic regions have been associated with heritable human diseases, but
attempts to elucidate biological mechanisms are impeded by an inability to discern which …

LncRNA: a link between RNA and cancer

G Yang, X Lu, L Yuan - Biochimica et Biophysica Acta (BBA)-Gene …, 2014 - Elsevier
Unraveling the gene expression networks governing cancer initiation and development is
essential while remains largely uncompleted. With the innovations in RNA-seq technologies …

[HTML][HTML] Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species

H Hezroni, D Koppstein, MG Schwartz, A Avrutin… - Cell reports, 2015 - cell.com
The inability to predict long noncoding RNAs from genomic sequence has impeded the use
of comparative genomics for studying their biology. Here, we develop methods that use RNA …

The evolution of lncRNA repertoires and expression patterns in tetrapods

A Necsulea, M Soumillon, M Warnefors, A Liechti… - Nature, 2014 - nature.com
Only a very small fraction of long noncoding RNAs (lncRNAs) are well characterized. The
evolutionary history of lncRNAs can provide insights into their functionality, but the absence …

The hallmarks of cancer: a long non-coding RNA point of view

T Gutschner, S Diederichs - RNA biology, 2012 - Taylor & Francis
With the advent of next generation sequencing methods and progress in transcriptome
analysis, it became obvious that the human genome contains much more than just protein …

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

MN Cabili, C Trapnell, L Goff, M Koziol… - Genes & …, 2011 - genesdev.cshlp.org
Large intergenic noncoding RNAs (lincRNAs) are emerging as key regulators of diverse
cellular processes. Determining the function of individual lincRNAs remains a challenge …

Transcription of the non-coding RNA upperhand controls Hand2 expression and heart development

KM Anderson, DM Anderson, JR McAnally, JM Shelton… - Nature, 2016 - nature.com
HAND2 is an ancestral regulator of heart development and one of four transcription factors
that control the reprogramming of fibroblasts into cardiomyocytes,,,. Deletion of Hand2 in …

[HTML][HTML] APF lncRNA regulates autophagy and myocardial infarction by targeting miR-188-3p

K Wang, CY Liu, LY Zhou, JX Wang, M Wang… - Nature …, 2015 - nature.com
The abnormal autophagy is associated with a variety of cardiovascular diseases. Long
noncoding RNAs (lncRNAs) are emerging as new factors in gene regulation, but how …