[HTML][HTML] Tandem domain swapping: determinants of multidomain protein misfolding

A Lafita, P Tian, RB Best, A Bateman - Current Opinion in Structural Biology, 2019 - Elsevier
Highlights•Domain swapping refers to the exchange of structural elements between protein
domains.•Experiments show that tandem homologous domains are prone to domain …

Creative destruction: New protein folds from old

C Alvarez-Carreño, RJ Gupta… - Proceedings of the …, 2022 - National Acad Sciences
Mechanisms of emergence and divergence of protein folds pose central questions in
biological sciences. Incremental mutation and stepwise adaptation explain relationships …

Exploring the sequence fitness landscape of a bridge between protein folds

P Tian, RB Best - PLoS computational biology, 2020 - journals.plos.org
Most foldable protein sequences adopt only a single native fold. Recent protein design
studies have, however, created protein sequences which fold into different structures apon …

Periscope Proteins are variable-length regulators of bacterial cell surface interactions

F Whelan, A Lafita, J Gilburt, C Dégut… - Proceedings of the …, 2021 - National Acad Sciences
Changes at the cell surface enable bacteria to survive in dynamic environments, such as
diverse niches of the human host. Here, we reveal “Periscope Proteins” as a widespread …

Tandem repeats of highly bioluminescent NanoLuc are refolded noncanonically by the Hsp70 machinery

D Apostolidou, P Zhang, D Pandya, K Bock… - Protein …, 2024 - Wiley Online Library
Chaperones are a large family of proteins crucial for maintaining cellular protein
homeostasis. One such chaperone is the 70 kDa heat shock protein (Hsp70), which plays a …

Modelling structural rearrangements in proteins using Euclidean distance matrices

A Lafita, A Bateman - F1000Research, 2020 - f1000research.com
Proteins undergo large structural rearrangements such as circular permutations,
dimerisation via domain swapping, and loss of core secondary structure elements in domain …

Computational discovery and modelling of tandem domain repeats in proteins

A Lafita Masip - 2021 - repository.cam.ac.uk
Abstract Domains are functional and evolutionary units of proteins that typically fold into
stable globular structures. A small subset of natural multidomain proteins contain large …

Mechanical and Thermal Stability of Tandem Repeats of Highly-Bioluminescent Protein NanoLuc

D Apostolidou - 2023 - search.proquest.com
Proteins are molecules found in all living kingdoms due to their several cellular functions.
They are comprised of amino acids, which are linked together forming long polypeptide …