Bacterial and archaeal symbioses with protists

F Husnik, D Tashyreva, V Boscaro, EE George, J Lukeš… - Current Biology, 2021 - cell.com
Most of the genetic, cellular, and biochemical diversity of life rests within single-celled
organisms—the prokaryotes (bacteria and archaea) and microbial eukaryotes (protists) …

Scientific novelty beyond the experiment

JE Hallsworth, Z Udaondo, C Pedrós‐Alió… - Microbial …, 2023 - Wiley Online Library
Practical experiments drive important scientific discoveries in biology, but theory‐based
research studies also contribute novel—sometimes paradigm‐changing—findings. Here, we …

The genomics and cell biology of host-beneficial intracellular infections

JP McCutcheon - Annual Review of Cell and Developmental …, 2021 - annualreviews.org
Microbes gain access to eukaryotic cells as food for bacteria-grazing protists, for host
protection by microbe-killing immune cells, or for microbial benefit when pathogens enter …

High-resolution spatial and genomic characterization of coral-associated microbial aggregates in the coral Stylophora pistillata

N Wada, MT Hsu, K Tandon, SSY Hsiao, HJ Chen… - Science …, 2022 - science.org
Bacteria commonly form aggregates in a range of coral species [termed coral-associated
microbial aggregates (CAMAs)], although these structures remain poorly characterized …

Microbiomes of microscopic marine invertebrates do not reveal signatures of phylosymbiosis

V Boscaro, CC Holt, NWL Van Steenkiste… - Nature …, 2022 - nature.com
Animals and microorganisms often establish close ecological relationships. However, much
of our knowledge about animal microbiomes comes from two deeply studied groups …

Ori-Finder 2022: a comprehensive web server for prediction and analysis of bacterial replication origins

MJ Dong, H Luo, F Gao - Genomics, Proteomics & …, 2022 - academic.oup.com
The replication of DNA is a complex biological process that is essential for life. Bacterial
DNA replication is initiated at genomic loci referred to as replication origins (oriC s) …

Denitrification and N2O Emission in Estuarine Sediments in Response to Ocean Acidification: From Process to Mechanism

X Su, L Cui, Y Tang, T Wen, K Yang… - Environmental …, 2022 - ACS Publications
Global estuarine ecosystems are experiencing severe nitrogen pollution and ocean
acidification (OA) simultaneously. Sedimentary denitrification is an important way of reactive …

Epipelagic nitrous oxide production offsets carbon sequestration by the biological pump

XS Wan, HX Sheng, M Dai, KL Casciotti… - Nature …, 2023 - nature.com
The removal of carbon dioxide from the atmosphere by the marine biological pump is a key
regulator of Earth's climate; however, the ocean also serves as a large source of nitrous …

Evolutionary inference across eukaryotes identifies universal features shaping organelle gene retention

K Giannakis, SJ Arrowsmith, L Richards, S Gasparini… - Cell Systems, 2022 - cell.com
Mitochondria and plastids power complex life. Why some genes and not others are retained
in their organelle DNA (oDNA) genomes remains a debated question. Here, we attempt to …

Anaerobic ciliates as a model group for studying symbioses in oxygen‐depleted environments

J Rotterová, VP Edgcomb, I Čepička… - Journal of Eukaryotic …, 2022 - Wiley Online Library
Anaerobiosis has independently evolved in multiple lineages of ciliates, allowing them to
colonize a variety of anoxic and oxygen‐depleted habitats. Anaerobic ciliates commonly …