[HTML][HTML] Clinical text data in machine learning: systematic review

I Spasic, G Nenadic - JMIR medical informatics, 2020 - medinform.jmir.org
Background: Clinical narratives represent the main form of communication within health
care, providing a personalized account of patient history and assessments, and offering rich …

Deep learning in clinical natural language processing: a methodical review

S Wu, K Roberts, S Datta, J Du, Z Ji, Y Si… - Journal of the …, 2020 - academic.oup.com
Objective This article methodically reviews the literature on deep learning (DL) for natural
language processing (NLP) in the clinical domain, providing quantitative analysis to answer …

Deep sentiment classification and topic discovery on novel coronavirus or COVID-19 online discussions: NLP using LSTM recurrent neural network approach

H Jelodar, Y Wang, R Orji… - IEEE Journal of Biomedical …, 2020 - ieeexplore.ieee.org
Internet forums and public social media, such as online healthcare forums, provide a
convenient channel for users (people/patients) concerned about health issues to discuss …

Enhancing clinical concept extraction with contextual embeddings

Y Si, J Wang, H Xu, K Roberts - Journal of the American Medical …, 2019 - academic.oup.com
Objective Neural network–based representations (“embeddings”) have dramatically
advanced natural language processing (NLP) tasks, including clinical NLP tasks such as …

[HTML][HTML] Chinese clinical named entity recognition with variant neural structures based on BERT methods

X Li, H Zhang, XH Zhou - Journal of biomedical informatics, 2020 - Elsevier
Abstract Clinical Named Entity Recognition (CNER) is a critical task which aims to identify
and classify clinical terms in electronic medical records. In recent years, deep neural …

Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison

B Song, F Li, Y Liu, X Zeng - Briefings in Bioinformatics, 2021 - academic.oup.com
The biomedical literature is growing rapidly, and the extraction of meaningful information
from the large amount of literature is increasingly important. Biomedical named entity …

Chinese clinical named entity recognition via multi-head self-attention based BiLSTM-CRF

Y An, X Xia, X Chen, FX Wu, J Wang - Artificial Intelligence in Medicine, 2022 - Elsevier
Clinical named entity recognition (CNER) is a fundamental step for many clinical Natural
Language Processing (NLP) systems, which aims to recognize and classify clinical entities …

[HTML][HTML] Clinical concept extraction: a methodology review

S Fu, D Chen, H He, S Liu, S Moon, KJ Peterson… - Journal of biomedical …, 2020 - Elsevier
Background Concept extraction, a subdomain of natural language processing (NLP) with a
focus on extracting concepts of interest, has been adopted to computationally extract clinical …

Reviewing methods of deep learning for diagnosing COVID-19, its variants and synergistic medicine combinations

Q Rafique, A Rehman, MS Afghan, HM Ahmad… - Computers in Biology …, 2023 - Elsevier
The COVID-19 pandemic has necessitated the development of reliable diagnostic methods
for accurately detecting the novel coronavirus and its variants. Deep learning (DL) …

Machine learning techniques for biomedical natural language processing: a comprehensive review

EH Houssein, RE Mohamed, AA Ali - IEEE Access, 2021 - ieeexplore.ieee.org
The widespread use of electronic health records (EHR) systems in health care provides a
large amount of real-world data, leading to new areas for clinical research. Natural language …