Bulk segregation analysis in the NGS era: a review of its teenage years

Z Li, Y Xu - The Plant Journal, 2022 - Wiley Online Library
Bulk segregation analysis (BSA) utilizes a strategy of pooling individuals with extreme
phenotypes to conduct economical and rapidly linked marker screening or quantitative trait …

Sequencing pools of individuals—mining genome-wide polymorphism data without big funding

C Schlötterer, R Tobler, R Kofler, V Nolte - Nature Reviews Genetics, 2014 - nature.com
The analysis of polymorphism data is becoming increasingly important as a complementary
tool to classical genetic analyses. Nevertheless, despite plunging sequencing costs …

Genomic evidence of rapid and stable adaptive oscillations over seasonal time scales in Drosophila

AO Bergland, EL Behrman, KR O'Brien… - PLoS …, 2014 - journals.plos.org
In many species, genomic data have revealed pervasive adaptive evolution indicated by the
fixation of beneficial alleles. However, when selection pressures are highly variable along a …

Bulked sample analysis in genetics, genomics and crop improvement

C Zou, P Wang, Y Xu - Plant biotechnology journal, 2016 - Wiley Online Library
Biological assay has been based on analysis of all individuals collected from sample
populations. Bulked sample analysis (BSA), which works with selected and pooled …

Genomic Evidence for Adaptive Inversion Clines in Drosophila melanogaster

M Kapun, DK Fabian, J Goudet… - Molecular biology and …, 2016 - academic.oup.com
Clines in chromosomal inversion polymorphisms—presumably driven by climatic gradients—
are common but there is surprisingly little evidence for selection acting on them. Here we …

Next‐generation biological control: the need for integrating genetics and genomics

K Leung, E Ras, KB Ferguson, S Ariëns… - Biological …, 2020 - Wiley Online Library
Biological control is widely successful at controlling pests, but effective biocontrol agents are
now more difficult to import from countries of origin due to more restrictive international trade …

Genomic basis for drought resistance in European beech forests threatened by climate change

M Pfenninger, F Reuss, A Kiebler, P Schönnenbeck… - Elife, 2021 - elifesciences.org
In the course of global climate change, Central Europe is experiencing more frequent and
prolonged periods of drought. The drought years 2018 and 2019 affected European …

Towards the identification of the loci of adaptive evolution

C Pardo‐Diaz, C Salazar… - Methods in Ecology and …, 2015 - Wiley Online Library
Establishing the genetic and molecular basis underlying adaptive traits is one of the major
goals of evolutionary geneticists in order to understand the connection between genotype …

Secondary contact and local adaptation contribute to genome‐wide patterns of clinal variation in Drosophila melanogaster

AO Bergland, R Tobler, J González… - Molecular …, 2016 - Wiley Online Library
Populations arrayed along broad latitudinal gradients often show patterns of clinal variation
in phenotype and genotype. Such population differentiation can be generated and …

Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource

M Kapun, JCB Nunez… - Molecular biology …, 2021 - academic.oup.com
Drosophila melanogaster is a leading model in population genetics and genomics, and a
growing number of whole-genome data sets from natural populations of this species have …