[HTML][HTML] MYB transcription factors and its regulation in secondary cell wall formation and lignin biosynthesis during xylem development

R Xiao, C Zhang, X Guo, H Li, H Lu - International Journal of Molecular …, 2021 - mdpi.com
The secondary wall is the main part of wood and is composed of cellulose, xylan, lignin, and
small amounts of structural proteins and enzymes. Lignin molecules can interact directly or …

Co-expression networks for plant biology: why and how

X Rao, RA Dixon - Acta biochimica et biophysica Sinica, 2019 - academic.oup.com
Co-expression network analysis is one of the most powerful approaches for interpretation of
large transcriptomic datasets. It enables characterization of modules of co-expressed genes …

[HTML][HTML] Improving wood properties for wood utilization through multi-omics integration in lignin biosynthesis

JP Wang, ML Matthews, CM Williams, R Shi… - Nature …, 2018 - nature.com
A multi-omics quantitative integrative analysis of lignin biosynthesis can advance the
strategic engineering of wood for timber, pulp, and biofuels. Lignin is polymerized from three …

AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula

D Sundell, NR Street, M Kumar, EJ Mellerowicz… - The Plant …, 2017 - academic.oup.com
Trees represent the largest terrestrial carbon sink and a renewable source of ligno-cellulose.
There is significant scope for yield and quality improvement in these largely undomesticated …

Single‐cell RNA sequencing reveals a high‐resolution cell atlas of xylem in Populus

H Li, X Dai, X Huang, M Xu, Q Wang… - Journal of Integrative …, 2021 - Wiley Online Library
High‐throughput single‐cell RNA sequencing (scRNA‐seq) has advantages over traditional
RNA‐seq to explore spatiotemporal information on gene dynamic expressions in …

Hierarchical Transcription Factor and Chromatin Binding Network for Wood Formation in Populus trichocarpa

H Chen, JP Wang, H Liu, H Li, YCJ Lin, R Shi… - The Plant …, 2019 - academic.oup.com
Wood remains the world's most abundant and renewable resource for timber and pulp and
is an alternative to fossil fuels. Understanding the molecular regulation of wood formation …

[HTML][HTML] Single-cell transcriptomics unveils xylem cell development and evolution

CC Tung, SC Kuo, CL Yang, JH Yu, CE Huang… - Genome Biology, 2023 - Springer
Background Xylem, the most abundant tissue on Earth, is responsible for lateral growth in
plants. Typical xylem has a radial system composed of ray parenchyma cells and an axial …

Deciphering the intricate hierarchical gene regulatory network: Unraveling multi-level regulation and modifications driving secondary cell wall formation

Z Wei, H Wei - Horticulture Research, 2024 - academic.oup.com
Wood quality is predominantly determined by the amount and the composition of secondary
cell walls (SCWs). Consequently, unraveling the molecular regulatory mechanisms …

MYB Transcription Factor161 Mediates Feedback Regulation of Secondary wall-associated NAC-Domain1 Family Genes for Wood Formation

Z Wang, Y Mao, Y Guo, J Gao, X Liu, S Li… - Plant …, 2020 - academic.oup.com
Wood formation is a complex process that involves cell differentiation, cell expansion,
secondary wall deposition, and programmed cell death. We constructed a four-layer wood …

[HTML][HTML] Transcriptional landscape of highly lignified poplar stems at single-cell resolution

Y Chen, S Tong, Y Jiang, F Ai, Y Feng, J Zhang, J Gong… - Genome biology, 2021 - Springer
Background Plant secondary growth depends on the activity of the vascular cambium, which
produces xylem and phloem. Wood derived from xylem is the most abundant form of …