[HTML][HTML] Regulatory principles and mechanisms governing the onset of random X-chromosome inactivation

T Schwämmle, EG Schulz - Current Opinion in Genetics & Development, 2023 - Elsevier
Highlights•Complex regulatory interactions ensure female-specific monoallelic Xist
expression.•Stochastic upregulation combined with a negative feedback can explain the Xist …

OCT4 activates a Suv39h1-repressive antisense lncRNA to couple histone H3 Lysine 9 methylation to pluripotency

LD Bernard, A Dubois, V Heurtier, V Fischer… - Nucleic acids …, 2022 - academic.oup.com
Abstract Histone H3 Lysine 9 (H3K9) methylation, a characteristic mark of heterochromatin,
is progressively implemented during development to contribute to cell fate restriction as …

Differential allelic expression among long non-coding RNAs

MB Heskett, PT Spellman, MJ Thayer - Non-coding RNA, 2021 - mdpi.com
Long non-coding RNAs (lncRNA) comprise a diverse group of non-protein-coding RNAs>
200 bp in length that are involved in various normal cellular processes and disease states …

CCIVR facilitates comprehensive identification of cis-natural antisense transcripts with their structural characteristics and expression profiles

T Ohhata, M Suzuki, S Sakai, K Ota, H Yokota… - Scientific Reports, 2022 - nature.com
Cis-natural antisense transcripts (cis-NATs) are transcribed from the same genomic locus as
their partner gene but from the opposite DNA strand and overlap with the partner gene …

BAF complex-mediated chromatin relaxation is required for establishment of X chromosome inactivation

A Keniry, N Jansz, LJ Gearing, I Wanigasuriya… - Nature …, 2022 - nature.com
The process of epigenetic silencing, while fundamentally important, is not yet completely
understood. Here we report a replenishable female mouse embryonic stem cell (mESC) …

Epigenetic inhibitors and their role in cancer therapy

N Abdelaziz, L Therachiyil, HQ Sadida, AM Ali… - International Review of …, 2023 - Elsevier
Epigenetic modifications to DNA are crucial for normal cellular and biological functioning.
DNA methylation, histone modifications, and chromatin remodeling are the most common …

Orchestrating Asymmetric Expression: Mechanisms behind Xist Regulation

SJ Luchsinger-Morcelle, J Gribnau, H Mira-Bontenbal - Epigenomes, 2024 - mdpi.com
Compensation for the gene dosage disequilibrium between sex chromosomes in mammals
is achieved in female cells by repressing one of its X chromosomes through a process called …

Gender dimorphism in hepatocarcinogenesis—DNA methylation modification regulated X‐chromosome inactivation escape molecule XIST

Z Dai, S Wang, X Guo, Y Wang, H Yin… - Clinical and …, 2023 - Wiley Online Library
Background Sex disparities constitute a significant issue in hepatocellular carcinoma (HCC).
However, the mechanism of gender dimorphism in HCC is still not completely understood …

Establishment and maintenance of random monoallelic expression

E Kanata, R Duffié, EG Schulz - Development, 2024 - journals.biologists.com
This Review elucidates the regulatory principles of random monoallelic expression by
focusing on two well-studied examples: the X-chromosome inactivation regulator Xist and …

Antisense transcription can induce expression memory via stable promoter repression

V Mutzel, T Schwämmle, S Oeverdieck, L Librenjak… - bioRxiv, 2024 - biorxiv.org
The capacity of cells to retain a memory of previous signals enables them to adopt unique
cell fates and adjust to their surrounding environment. The underlying gene expression …