Normal modes in internal coordinates (IC) furnish an excellent way to model functional collective motions of macromolecular machines, but exhibit a high computational cost when …
M Berljafa, D Wortmann… - … and Computation: Practice …, 2015 - Wiley Online Library
In many scientific applications, the solution of nonlinear differential equations are obtained through the setup and solution of a number of successive eigenproblems. These …
The most realistic way to get information about systems is to implement the system (physically), to interpret obtained results. However, because of some reasons such as …
D Davidović - 2021 44th International Convention on …, 2021 - ieeexplore.ieee.org
Solving large-scale eigenvalue problems presents a central problem in many research fields, such as electronic structure calculation, macromolecular simulations, solid states …
I Gemp, C Chen, B McWilliams - arXiv preprint arXiv:2206.04993, 2022 - arxiv.org
The symmetric generalized eigenvalue problem (SGEP) is a fundamental concept in numerical linear algebra. It captures the solution of many classical machine learning …
The increasing demand for mobile data has placed significant strain on radio access networks (RANs), leading to a continuous need for increased network capacity. In keeping …
We introduce a new iterative Krylov subspace-based eigensolver for the simulation of macromolecular motions on desktop multithreaded platforms equipped with multicore …
R Ralha - Applied Mathematics and Computation, 2012 - Elsevier
Bisection (of a real interval) is a well known algorithm to compute eigenvalues of symmetric matrices. Given an initial interval [a, b], convergence to an eigenvalue which has size much …
We consider the solution of large-scale eigenvalue problems that appear in the motion simulation of complex macromolecules on desktop platforms. To tackle the dimension of the …