A global model of tropospheric chlorine chemistry: Organic versus inorganic sources and impact on methane oxidation

R Hossaini, MP Chipperfield… - Journal of …, 2016 - Wiley Online Library
Chlorine atoms (Cl) are highly reactive toward hydrocarbons in the Earth's troposphere,
including the greenhouse gas methane (CH4). However, the regional and global CH4 sink …

Exploring large macromolecular functional motions on clusters of multicore processors

JR Lopez-Blanco, R Reyes, JI Aliaga, RM Badia… - Journal of …, 2013 - Elsevier
Normal modes in internal coordinates (IC) furnish an excellent way to model functional
collective motions of macromolecular machines, but exhibit a high computational cost when …

An optimized and scalable eigensolver for sequences of eigenvalue problems

M Berljafa, D Wortmann… - … and Computation: Practice …, 2015 - Wiley Online Library
In many scientific applications, the solution of nonlinear differential equations are obtained
through the setup and solution of a number of successive eigenproblems. These …

[PDF][PDF] Investigaton of computational load and parallel computing of Volterra series method for frequency analysis of nonlinear systems

S Kacar, I Cankaya, AF Boz - Optoelectronics and advanced …, 2014 - researchgate.net
The most realistic way to get information about systems is to implement the system
(physically), to interpret obtained results. However, because of some reasons such as …

An overview of dense eigenvalue solvers for distributed memory systems

D Davidović - 2021 44th International Convention on …, 2021 - ieeexplore.ieee.org
Solving large-scale eigenvalue problems presents a central problem in many research
fields, such as electronic structure calculation, macromolecular simulations, solid states …

The Symmetric Generalized Eigenvalue Problem as a Nash Equilibrium

I Gemp, C Chen, B McWilliams - arXiv preprint arXiv:2206.04993, 2022 - arxiv.org
The symmetric generalized eigenvalue problem (SGEP) is a fundamental concept in
numerical linear algebra. It captures the solution of many classical machine learning …

AI Based Methods for Matrix Multiplication in High Resolution Simulations of Radio Access Networks

M Johnson, H Forslund - 2023 - diva-portal.org
The increasing demand for mobile data has placed significant strain on radio access
networks (RANs), leading to a continuous need for increased network capacity. In keeping …

A fast band–Krylov eigensolver for macromolecular functional motion simulation on multicore architectures and graphics processors

JI Aliaga, P Alonso, JM Badía, P Chacón… - Journal of computational …, 2016 - Elsevier
We introduce a new iterative Krylov subspace-based eigensolver for the simulation of
macromolecular motions on desktop multithreaded platforms equipped with multicore …

The geometric mean algorithm

R Ralha - Applied Mathematics and Computation, 2012 - Elsevier
Bisection (of a real interval) is a well known algorithm to compute eigenvalues of symmetric
matrices. Given an initial interval [a, b], convergence to an eigenvalue which has size much …

Out-of-core solution of eigenproblems for macromolecular simulations

JI Aliaga, D Davidović, ES Quintana-Ortí - Parallel Processing and Applied …, 2014 - Springer
We consider the solution of large-scale eigenvalue problems that appear in the motion
simulation of complex macromolecules on desktop platforms. To tackle the dimension of the …