A presumed missense variant in the U2AF2 gene causes exon skipping in neurodevelopmental diseases

X Wang, B You, F Yin, C Chen, H He, F Liu… - Journal of Human …, 2023 - nature.com
U2 small nuclear RNA auxiliary factor 2 (U2AF2) is an indispensable pre-mRNA splicing
factor in the early process of splicing. Recently, U2AF2 was reported as a novel candidate …

Benchmarking deep learning splice prediction tools using functional splice assays

TV Riepe, M Khan, S Roosing, FPM Cremers… - Human …, 2021 - Wiley Online Library
Hereditary disorders are frequently caused by genetic variants that affect pre‐messenger
RNA splicing. Though genetic variants in the canonical splice motifs are almost always …

Antisense Oligonucleotide-Based Rescue of Aberrant Splicing Defects Caused by 15 Pathogenic Variants in ABCA4

TZ Tomkiewicz, N Suárez-Herrera… - International journal of …, 2021 - mdpi.com
The discovery of novel intronic variants in the ABCA4 locus has contributed significantly to
solving the missing heritability in Stargardt disease (STGD1). The increasing number of …

Experimental model systems used in the preclinical development of nucleic acid therapeutics

H Zhou, V Arechavala-Gomeza… - nucleic acid therapeutics, 2023 - liebertpub.com
Preclinical evaluation of nucleic acid therapeutics (NATs) in relevant experimental model
systems is essential for NAT drug development. As part of COST Action “DARTER”(Delivery …

ABCA4 c. 859-25A> G, a Frequent Palestinian Founder Mutation Affecting the Intron 7 Branchpoint, Is Associated With Early-Onset Stargardt Disease

Z Corradi, M Salameh, M Khan, E Héon… - … & Visual Science, 2022 - iovs.arvojournals.org
Purpose: The effect of noncoding variants is often unknown in the absence of functional
assays. Here, we characterized an ABCA4 intron 7 variant, c. 859-25A> G, identified in …

Mutations at a split codon in the GTPase-encoding domain of OPA1 cause dominant optic atrophy through different molecular mechanisms

N Weisschuh, V Marino, K Schäferhoff… - Human Molecular …, 2022 - academic.oup.com
Exonic (ie coding) variants in genes associated with disease can exert pathogenic effects
both at the protein and mRNA level, either by altering the amino acid sequence or by …

SCN1A intronic variants impact on Nav1. 1 protein expression and sodium channel function, and associated with epilepsy phenotypic severity

J Ji, X Zhou, Y Lu, L Shen, L Li, Z Chen, Y Shi, W Liao… - Gene, 2025 - Elsevier
High-throughput sequencing has identified numerous intronic variants in the SCN1A gene in
epilepsy patients. Abnormal mRNA splicing caused by these variants can lead to significant …

[HTML][HTML] Splicing accuracy varies across human introns, tissues and age

S García-Ruiz, D Zhang, EK Gustavsson… - BioRxiv, 2023 - ncbi.nlm.nih.gov
Alternative splicing impacts most multi-exonic human genes. Inaccuracies during this
process may have an important role in ageing and disease. Here, we investigated mis …

Intronic OTOF mutation causes an atypical splicing defect resulting in auditory neuropathy spectrum disorder

S Mohammadi, H Jafari Khamirani, S Zoghi… - Journal of Genetics, 2023 - Springer
Pathogenic variants in OTOF cause auditory neuropathy spectrum disorder (ANSD), namely
prelingual nonsyndromic ANSD and temperature-sensitive ANSD (TS-ANSD). All study …

Investigation of Mcl-1 alternative splicing regulation by GQC-05, a putative G–quadruplex ligand

H Esenkaya - 2022 - figshare.le.ac.uk
The Bcl-2 family of proteins are regulators of apoptosis. One of the Bcl-2 genes, Mcl-1,
produces two antagonistic isoforms by alternative splicing. The larger and more abundant …