Neural coding with bursts—current state and future perspectives

F Zeldenrust, WJ Wadman, B Englitz - Frontiers in computational …, 2018 - frontiersin.org
Neuronal action potentials or spikes provide a long-range, noise-resistant means of
communication between neurons. As point processes single spikes contain little information …

From end to end: Gaining, sorting, and employing high-density neural single unit recordings

RB Bod, J Rokai, D Meszéna, R Fiáth… - Frontiers in …, 2022 - frontiersin.org
The meaning behind neural single unit activity has constantly been a challenge, so it will
persist in the foreseeable future. As one of the most sourced strategies, detecting neural …

Spike sorting based on shape, phase, and distribution features, and K-TOPS clustering with validity and error indices

CR Caro-Martín, JM Delgado-García, A Gruart… - Scientific reports, 2018 - nature.com
Spike sorting is one of the most important data analysis problems in neurophysiology. The
precision in all steps of the spike-sorting procedure critically affects the accuracy of all …

Synaptic microcircuit modeling with 3D cocultures of astrocytes and neurons from human pluripotent stem cells

C Cvetkovic, N Basu, R Krencik - Journal of visualized …, 2018 - pmc.ncbi.nlm.nih.gov
A barrier to our understanding of how various cell types and signals contribute to synaptic
circuit function is the lack of relevant models for studying the human brain. One emerging …

Spectral entropy based neuronal network synchronization analysis based on microelectrode array measurements

FE Kapucu, I Välkki, JE Mikkonen, C Leone… - Frontiers in …, 2016 - frontiersin.org
Synchrony and asynchrony are essential aspects of the functioning of interconnected
neuronal cells and networks. New information on neuronal synchronization can be expected …

Network-wide adaptive burst detection depicts neuronal activity with improved accuracy

IA Välkki, K Lenk, JE Mikkonen, FE Kapucu… - Frontiers in …, 2017 - frontiersin.org
Neuronal networks are often characterized by their spiking and bursting statistics.
Previously, we introduced an adaptive burst analysis method which enhances the analysis …

Advances in human stem cell-derived neuronal cell culturing and analysis

L Ylä-Outinen, JMA Tanskanen, FE Kapucu… - In Vitro Neuronal …, 2019 - Springer
This chapter provides an overview of the current stage of human in vitro functional neuronal
cultures, their biological application areas, and modalities to analyze their behavior. During …

A line of MEA signal analysis methods for human stem cell-derived and other dynamic neuronal cultures

JMA Tanskanen, FE Kapucu… - Frontiers in Cellular …, 2018 - frontiersin.org
Here, we review the line of MEA signal analysis methods we have developed. Our target has
been the analysis needs of MEA signals measured from developing human pluripotent stem …

Taller Peaks: an improved spike detection algorithm that simultaneously reduces type I and type II errors for Wave_clus

M Okatan - Turkish Journal of Electrical Engineering and …, 2017 - journals.tubitak.gov.tr
Wave_clus is an unsupervised spike detection and sorting algorithm that has been used in
dozens of experimental studies as a spike sorting tool. It is often used as a benchmark for …

The role of cypin in regulating synaptic content and transmission

AR Rodriguez - 2016 - rucore.libraries.rutgers.edu
©2016 Ana R. Rodriguez ALL RIGHTS RESERVED Page 1 ©2016 Ana R. Rodriguez ALL
RIGHTS RESERVED Page 2 THE ROLE OF CYPIN IN REGULATING SYNAPTIC CONTENT …