[HTML][HTML] Complex biomarker discovery in neuroimaging data: Finding a needle in a haystack

G Atluri, K Padmanabhan, G Fang, M Steinbach… - NeuroImage …, 2013 - Elsevier
Neuropsychiatric disorders such as schizophrenia, bipolar disorder and Alzheimer's disease
are major public health problems. However, despite decades of research, we currently have …

A structured view on pattern mining-based biclustering

R Henriques, C Antunes, SC Madeira - Pattern Recognition, 2015 - Elsevier
Mining matrices to find relevant biclusters, subsets of rows exhibiting a coherent pattern over
a subset of columns, is a critical task for a wide-set of biomedical and social applications …

BicPAM: Pattern-based biclustering for biomedical data analysis

R Henriques, SC Madeira - Algorithms for Molecular Biology, 2014 - Springer
Background Biclustering, the discovery of sets of objects with a coherent pattern across a
subset of conditions, is a critical task to study a wide-set of biomedical problems, where …

Biclustering data analysis: a comprehensive survey

EN Castanho, H Aidos, SC Madeira - Briefings in Bioinformatics, 2024 - academic.oup.com
Biclustering, the simultaneous clustering of rows and columns of a data matrix, has proved
its effectiveness in bioinformatics due to its capacity to produce local instead of global …

Mining low-support discriminative patterns from dense and high-dimensional data

G Fang, G Pandey, W Wang, M Gupta… - … on Knowledge and …, 2010 - ieeexplore.ieee.org
Discriminative patterns can provide valuable insights into data sets with class labels, that
may not be available from the individual features or the predictive models built using them …

BicSPAM: flexible biclustering using sequential patterns

R Henriques, SC Madeira - BMC bioinformatics, 2014 - Springer
Background Biclustering is a critical task for biomedical applications. Order-preserving
biclusters, submatrices where the values of rows induce the same linear ordering across …

Cobi: pattern based co-regulated biclustering of gene expression data

S Roy, DK Bhattacharyya, JK Kalita - Pattern Recognition Letters, 2013 - Elsevier
Co-regulation is a common phenomenon in gene expression. Finding positively and
negatively co-regulated gene clusters from gene expression data is a real need. Existing …

Biclustering with flexible plaid models to unravel interactions between biological processes

R Henriques, SC Madeira - IEEE/ACM Transactions on …, 2015 - ieeexplore.ieee.org
Genes can participate in multiple biological processes at a time and thus their expression
can be seen as a composition of the contributions from the active processes. Biclustering …

[HTML][HTML] A multi-block clustering algorithm for high dimensional binarized sparse data

ZT Kosztyán, A Telcs, J Abonyi - Expert Systems with Applications, 2022 - Elsevier
We introduce a multidimensional multiblock clustering (MDMBC) algorithm in this paper.
MDMBC can generate overlapping clusters with similar values along clusters of dimensions …

[PDF][PDF] Directional pattern matching for character recognition revisited

H Fujisawa, CL Liu - Seventh International Conference on …, 2003 - researchgate.net
Directional features have been successfully used for the recognition of both machine-printed
and handwritten Kanji characters for the last decade. This paper attempts to explain why the …